4tx4
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 4tx4 is ON HOLD Authors: Pereira, H.M, Valadares, N., Monteiro-Junior, J.E., Carvalho, C.P.S., Grangeiro, T.B. Description: Crystal Structure of a ...) |
|||
(8 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Crystal Structure of a Single-Domain Cysteine Protease Inhibitor from Cowpea (Vigna unguiculata)== | |
+ | <StructureSection load='4tx4' size='340' side='right'caption='[[4tx4]], [[Resolution|resolution]] 1.95Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4tx4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vigna_unguiculata Vigna unguiculata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TX4 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tx4 OCA], [https://pdbe.org/4tx4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tx4 RCSB], [https://www.ebi.ac.uk/pdbsum/4tx4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tx4 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/CYTI_VIGUN CYTI_VIGUN] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Two cysteine proteinase inhibitors from cowpea, VuCys1 and VuCys2, were produced in E. coli ArcticExpress (DE3). The recombinant products strongly inhibited papain and chymopapain as well as the midgut proteases from Callosobruchus maculatus larvae, a bruchid that uses cysteine proteases as major digestive enzymes. Heat treatment at 100 degrees C for up to 60min or incubation at various pH values caused little reduction in the papain inhibitory activity of both inhibitors. Moreover, minor conformational variations, as probed by circular dichroism spectroscopy, were observed after VuCys1 and VuCys2 were subjected to these treatments. The crystal structure of VuCys1 was determined at a resolution of 1.95A, revealing a domain-swapped dimer in the asymmetric unit. However, the two lobes of the domain-swapped dimer are positioned closer to each other in VuCys1 in comparison to other similar cystatin structures. Moreover, some polar residues from opposite lobes recruit water molecules, forming a hydrogen bond network that mediates contacts between the lobes, thus generating an extended open interface. Due to the closer distance between the lobes, a small hydrophobic core is also formed, further stabilizing the folded domain-swapped dimer. These structural features might account for the extraordinary thermal and pH stability of VuCys1. | ||
- | + | Expression in Escherichia coli of cysteine protease inhibitors from cowpea (Vigna unguiculata): The crystal structure of a single-domain cystatin gives insights on its thermal and pH stability.,Monteiro Junior JE, Valadares NF, Pereira HD, Dyszy FH, da Costa Filho AJ, Uchoa AF, de Oliveira AS, da Silveira Carvalho CP, Grangeiro TB Int J Biol Macromol. 2017 Sep;102:29-41. doi: 10.1016/j.ijbiomac.2017.04.008., Epub 2017 Apr 4. PMID:28389401<ref>PMID:28389401</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
+ | </div> | ||
+ | <div class="pdbe-citations 4tx4" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Vigna unguiculata]] | ||
+ | [[Category: Carvalho CPS]] | ||
+ | [[Category: Grangeiro TB]] | ||
+ | [[Category: Monteiro-Junior JE]] | ||
+ | [[Category: Pereira HM]] | ||
+ | [[Category: Valadares N]] |
Current revision
Crystal Structure of a Single-Domain Cysteine Protease Inhibitor from Cowpea (Vigna unguiculata)
|