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4v11

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'''Unreleased structure'''
 
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The entry 4v11 is ON HOLD until Paper Publication
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==Structure of Synaptotagmin-1 with SV2A peptide phosphorylated at Thr84==
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<StructureSection load='4v11' size='340' side='right'caption='[[4v11]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4v11]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V11 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V11 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v11 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v11 OCA], [https://pdbe.org/4v11 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v11 RCSB], [https://www.ebi.ac.uk/pdbsum/4v11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v11 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SYT1_HUMAN SYT1_HUMAN] May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse. It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone. A Ca(2+)-dependent interaction between synaptotagmin and putative receptors for activated protein kinase C has also been reported. It can bind to at least three additional proteins in a Ca(2+)-independent manner; these are neurexins, syntaxin and AP2.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Synaptic vesicle protein 2A (SV2A) is a ubiquitous component of synaptic vesicles (SVs). It has roles in both SV trafficking and neurotransmitter release. We demonstrate that Casein kinase 1 family members, including isoforms of Tau-tubulin protein kinases (TTBK1 and TTBK2), phosphorylate human SV2A at two constellations of residues, namely Cluster-1 (Ser42, Ser45, and Ser47) and Cluster-2 (Ser80, Ser81, and Thr84). These residues are also phosphorylated in vivo, and the phosphorylation of Thr84 within Cluster-2 is essential for triggering binding to the C2B domain of human synaptotagmin-1. We show by crystallographic and other analyses that the phosphorylated Thr84 residue binds to a pocket formed by three conserved Lys residues (Lys314, Lys326, and Lys328) on the surface of the synaptotagmin-1 C2B domain. Finally, we observed dysfunctional synaptotagmin-1 retrieval during SV endocytosis by ablating its phospho-dependent interaction with SV2A, knockdown of SV2A, or rescue with a phosphorylation-null Thr84 SV2A mutant in primary cultures of mouse neurons. This study reveals fundamental details of how phosphorylation of Thr84 on SV2A controls its interaction with synaptotagmin-1 and implicates SV2A as a phospho-dependent chaperone required for the specific retrieval of synaptotagmin-1 during SV endocytosis.
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Authors: Zhang, N., Gordon, S.L., Fritsch, M.J., Esoof, N., Campbell, D., Gourlay, R., Velupillai, S., Macartney, T., Peggie, M., vanAalten, D.M.F., Cousin, M.A., Alessi, D.R.
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Phosphorylation of Synaptic Vesicle Protein 2A at Thr84 by Casein Kinase 1 Family Kinases Controls the Specific Retrieval of Synaptotagmin-1.,Zhang N, Gordon SL, Fritsch MJ, Esoof N, Campbell DG, Gourlay R, Velupillai S, Macartney T, Peggie M, van Aalten DM, Cousin MA, Alessi DR J Neurosci. 2015 Feb 11;35(6):2492-507. doi: 10.1523/JNEUROSCI.4248-14.2015. PMID:25673844<ref>PMID:25673844</ref>
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Description: Structure of Synaptotagmin-1 with SV2A peptide phosphorylated at Thr84
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Cousin, M.A]]
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<div class="pdbe-citations 4v11" style="background-color:#fffaf0;"></div>
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[[Category: Gordon, S.L]]
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[[Category: Vanaalten, D.M.F]]
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==See Also==
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[[Category: Velupillai, S]]
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*[[Synaptotagmin 3D structures|Synaptotagmin 3D structures]]
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[[Category: Fritsch, M.J]]
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== References ==
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[[Category: Gourlay, R]]
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<references/>
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[[Category: Campbell, D]]
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__TOC__
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[[Category: Zhang, N]]
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</StructureSection>
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[[Category: Esoof, N]]
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[[Category: Homo sapiens]]
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[[Category: Macartney, T]]
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[[Category: Large Structures]]
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[[Category: Alessi, D.R]]
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[[Category: Alessi DR]]
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[[Category: Peggie, M]]
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[[Category: Campbell D]]
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[[Category: Cousin MA]]
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[[Category: Esoof N]]
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[[Category: Fritsch MJ]]
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[[Category: Gordon SL]]
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[[Category: Gourlay R]]
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[[Category: Macartney T]]
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[[Category: Peggie M]]
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[[Category: Velupillai S]]
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[[Category: Zhang N]]
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[[Category: VanAalten DMF]]

Current revision

Structure of Synaptotagmin-1 with SV2A peptide phosphorylated at Thr84

PDB ID 4v11

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