This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4xjb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:48, 10 January 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==X-ray structure of Lysozyme1==
==X-ray structure of Lysozyme1==
-
<StructureSection load='4xjb' size='340' side='right' caption='[[4xjb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='4xjb' size='340' side='right'caption='[[4xjb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4xjb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XJB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XJB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4xjb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XJB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XJB FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xjb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xjb OCA], [http://pdbe.org/4xjb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xjb RCSB], [http://www.ebi.ac.uk/pdbsum/4xjb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xjb ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xjb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xjb OCA], [https://pdbe.org/4xjb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xjb RCSB], [https://www.ebi.ac.uk/pdbsum/4xjb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xjb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
+
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 4xjb" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4xjb" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 24: Line 27:
</StructureSection>
</StructureSection>
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
-
[[Category: Lysozyme]]
+
[[Category: Large Structures]]
-
[[Category: Caffrey, M]]
+
[[Category: Caffrey M]]
-
[[Category: Diederichs, K]]
+
[[Category: Diederichs K]]
-
[[Category: Huang, C Y]]
+
[[Category: Huang CY]]
-
[[Category: Olieric, V]]
+
[[Category: Olieric V]]
-
[[Category: Wang, M]]
+
[[Category: Wang M]]
-
[[Category: Hydrolase]]
+
-
[[Category: Muramidase]]
+
-
[[Category: N-acetylmuramide glycanhydrolase]]
+

Current revision

X-ray structure of Lysozyme1

PDB ID 4xjb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools