This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4y9p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:54, 10 January 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==PA3825-EAL Ca-CdG Structure==
==PA3825-EAL Ca-CdG Structure==
-
<StructureSection load='4y9p' size='340' side='right' caption='[[4y9p]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
+
<StructureSection load='4y9p' size='340' side='right'caption='[[4y9p]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4y9p]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y9P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y9P FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4y9p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y9P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y9P FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.44&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4y9m|4y9m]], [[4y9n|4y9n]], [[4y8e|4y8e]], [[4y9o|4y9o]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y9p OCA], [http://pdbe.org/4y9p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y9p RCSB], [http://www.ebi.ac.uk/pdbsum/4y9p PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y9p OCA], [https://pdbe.org/4y9p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y9p RCSB], [https://www.ebi.ac.uk/pdbsum/4y9p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y9p ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9HXH7_PSEAE Q9HXH7_PSEAE]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bellini, D]]
+
[[Category: Large Structures]]
-
[[Category: Horrell, S]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Strange, R]]
+
[[Category: Bellini D]]
-
[[Category: Wagner, A]]
+
[[Category: Horrell S]]
-
[[Category: Walsh, M A]]
+
[[Category: Strange R]]
-
[[Category: Cyclic di-gmp]]
+
[[Category: Wagner A]]
-
[[Category: Eal]]
+
[[Category: Walsh MA]]
-
[[Category: Signaling protein]]
+

Current revision

PA3825-EAL Ca-CdG Structure

PDB ID 4y9p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools