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4z88

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==SH3-II of Drosophila Rim-binding protein with Aplip1 peptide==
==SH3-II of Drosophila Rim-binding protein with Aplip1 peptide==
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<StructureSection load='4z88' size='340' side='right' caption='[[4z88]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
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<StructureSection load='4z88' size='340' side='right'caption='[[4z88]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4z88]] is a 24 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z88 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Z88 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4z88]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z88 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Z88 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2csq|2csq]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4z88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z88 OCA], [https://pdbe.org/4z88 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4z88 RCSB], [https://www.ebi.ac.uk/pdbsum/4z88 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4z88 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4z88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z88 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4z88 RCSB], [http://www.ebi.ac.uk/pdbsum/4z88 PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/JIP1_DROME JIP1_DROME]] The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interactions with the JNK-signaling components and motor proteins (By similarity).
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[https://www.uniprot.org/uniprot/A0A0B4JDC9_DROME A0A0B4JDC9_DROME]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Synaptic vesicles (SVs) fuse at active zones (AZs) covered by a protein scaffold, at Drosophila synapses comprised of ELKS family member Bruchpilot (BRP) and RIM-binding protein (RBP). We here demonstrate axonal co-transport of BRP and RBP using intravital live imaging, with both proteins co-accumulating in axonal aggregates of several transport mutants. RBP, via its C-terminal Src-homology 3 (SH3) domains, binds Aplip1/JIP1, a transport adaptor involved in kinesin-dependent SV transport. We show in atomic detail that RBP C-terminal SH3 domains bind a proline-rich (PxxP) motif of Aplip1/JIP1 with submicromolar affinity. Pointmutating this PxxP motif provoked formation of ectopic AZ-like structures at axonal membranes. Direct interactions between AZ proteins and transport adaptors seem to provide complex avidity and shield synaptic interaction surfaces of pre-assembled scaffold protein transport complexes, thus, favouring physiological synaptic AZ assembly over premature assembly at axonal membranes.
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A high affinity RIM-binding protein/Aplip1 interaction prevents the formation of ectopic axonal active zones.,Siebert M, Bohme MA, Driller JH, Babikir H, Mampell MM, Rey U, Ramesh N, Matkovic T, Holton N, Reddy-Alla S, Gottfert F, Kamin D, Quentin C, Klinedinst S, Andlauer TF, Hell SW, Collins CA, Wahl MC, Loll B, Sigrist SJ Elife. 2015 Aug 14;4. doi: 10.7554/eLife.06935. PMID:26274777<ref>PMID:26274777</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4z88" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Boehme, M A]]
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[[Category: Drosophila melanogaster]]
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[[Category: Driller, J H]]
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[[Category: Large Structures]]
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[[Category: Holton, N]]
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[[Category: Boehme MA]]
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[[Category: Loll, B]]
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[[Category: Driller JH]]
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[[Category: Siebert, M]]
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[[Category: Holton N]]
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[[Category: Sigrist, S J]]
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[[Category: Loll B]]
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[[Category: Wahl, M C]]
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[[Category: Siebert M]]
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[[Category: Active zone]]
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[[Category: Sigrist SJ]]
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[[Category: Aplip1]]
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[[Category: Wahl MC]]
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[[Category: Rim-binding protein]]
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[[Category: Sh3 domain]]
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[[Category: Synapse]]
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Current revision

SH3-II of Drosophila Rim-binding protein with Aplip1 peptide

PDB ID 4z88

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