This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ac0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:07, 10 January 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='5ac0' size='340' side='right'caption='[[5ac0]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='5ac0' size='340' side='right'caption='[[5ac0]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ac0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ovis_ammon_aries Ovis ammon aries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AC0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AC0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ac0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ovis_aries Ovis aries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AC0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AC0 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K9P:1-[(1S)-1-METHYL-5-OXIDANYL-1,2-DIHYDROBENZO[E]INDOL-3-YL]HEXAN-1-ONE'>K9P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5abm|5abm]], [[5ac1|5ac1]], [[5ac2|5ac2]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K9P:1-[(1S)-1-METHYL-5-OXIDANYL-1,2-DIHYDROBENZO[E]INDOL-3-YL]HEXAN-1-ONE'>K9P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Retinal_dehydrogenase Retinal dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.36 1.2.1.36] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ac0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ac0 OCA], [https://pdbe.org/5ac0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ac0 RCSB], [https://www.ebi.ac.uk/pdbsum/5ac0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ac0 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ac0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ac0 OCA], [http://pdbe.org/5ac0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ac0 RCSB], [http://www.ebi.ac.uk/pdbsum/5ac0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ac0 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/AL1A1_SHEEP AL1A1_SHEEP]] Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.
+
[https://www.uniprot.org/uniprot/AL1A1_SHEEP AL1A1_SHEEP] Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 28: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Ovis ammon aries]]
+
[[Category: Ovis aries]]
-
[[Category: Retinal dehydrogenase]]
+
[[Category: Blank ID]]
-
[[Category: Blank, I D]]
+
[[Category: Harteis S]]
-
[[Category: Harteis, S]]
+
[[Category: Koch MF]]
-
[[Category: Koch, M F]]
+
[[Category: Ochsenfeld C]]
-
[[Category: Ochsenfeld, C]]
+
[[Category: Pestel G]]
-
[[Category: Pestel, G]]
+
[[Category: Schneider S]]
-
[[Category: Schneider, S]]
+
[[Category: Sieber SA]]
-
[[Category: Sieber, S A]]
+
[[Category: Tietze LF]]
-
[[Category: Tietze, L F]]
+
-
[[Category: Aldehyde dehydrogenase activity]]
+
-
[[Category: Oxidation-reduction process]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

ovis aries Aldehyde Dehydrogenase 1A1 in complex with a duocarmycin analog

PDB ID 5ac0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5ac0"
Personal tools