This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5akc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:11, 10 January 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
{{Large structure}}
+
 
==MutS in complex with the N-terminal domain of MutL - crystal form 2==
==MutS in complex with the N-terminal domain of MutL - crystal form 2==
-
<StructureSection load='5akc' size='340' side='right' caption='[[5akc]], [[Resolution|resolution]] 6.60&Aring;' scene=''>
+
<StructureSection load='5akc' size='340' side='right'caption='[[5akc]], [[Resolution|resolution]] 6.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5akc]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AKC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AKC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5akc]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AKC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 6.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5akb|5akb]], [[5akd|5akd]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5akc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5akc OCA], [http://pdbe.org/5akc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5akc RCSB], [http://www.ebi.ac.uk/pdbsum/5akc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5akc ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5akc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5akc OCA], [https://pdbe.org/5akc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5akc RCSB], [https://www.ebi.ac.uk/pdbsum/5akc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5akc ProSAT]</span></td></tr>
</table>
</table>
-
{{Large structure}}
 
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MUTS_ECOLI MUTS_ECOLI]] This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. [[http://www.uniprot.org/uniprot/MUTL_ECOLI MUTL_ECOLI]] This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of the final effector complex. The ATPase activity of MutL is stimulated by DNA.
+
[https://www.uniprot.org/uniprot/MUTS_ECOLI MUTS_ECOLI] This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 5akc" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5akc" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[DNA mismatch repair protein 3D structures|DNA mismatch repair protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecoli]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Cristovao, M]]
+
[[Category: Large Structures]]
-
[[Category: Fish, A]]
+
[[Category: Cristovao M]]
-
[[Category: Friedhoff, P]]
+
[[Category: Fish A]]
-
[[Category: Groothuizen, F S]]
+
[[Category: Friedhoff P]]
-
[[Category: Hermans, N]]
+
[[Category: Groothuizen FS]]
-
[[Category: Lebbink, J H.G]]
+
[[Category: Hermans N]]
-
[[Category: Marx, A D]]
+
[[Category: Lebbink JHG]]
-
[[Category: Murshudov, G N]]
+
[[Category: Marx AD]]
-
[[Category: Nicholls, R A]]
+
[[Category: Murshudov GN]]
-
[[Category: Reumer, A]]
+
[[Category: Nicholls RA]]
-
[[Category: Sixma, T K]]
+
[[Category: Reumer A]]
-
[[Category: Winkler, I]]
+
[[Category: Sixma TK]]
-
[[Category: Winterwerp, H H.K]]
+
[[Category: Winkler I]]
-
[[Category: Complex]]
+
[[Category: Winterwerp HHK]]
-
[[Category: Crosslinking]]
+
-
[[Category: Dna mismatch repair]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Sliding clamp]]
+

Current revision

MutS in complex with the N-terminal domain of MutL - crystal form 2

PDB ID 5akc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools