This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ap9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:14, 10 January 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Controlled lid-opening in Thermomyces lanuginosus lipase - a switch for activity and binding==
==Controlled lid-opening in Thermomyces lanuginosus lipase - a switch for activity and binding==
-
<StructureSection load='5ap9' size='340' side='right' caption='[[5ap9]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='5ap9' size='340' side='right'caption='[[5ap9]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ap9]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AP9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AP9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ap9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AP9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AP9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Triacylglycerol_lipase Triacylglycerol lipase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.3 3.1.1.3] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ap9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ap9 OCA], [http://pdbe.org/5ap9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ap9 RCSB], [http://www.ebi.ac.uk/pdbsum/5ap9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ap9 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ap9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ap9 OCA], [https://pdbe.org/5ap9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ap9 RCSB], [https://www.ebi.ac.uk/pdbsum/5ap9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ap9 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LIP_THELA LIP_THELA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 19:
</div>
</div>
<div class="pdbe-citations 5ap9" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5ap9" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Lipase 3D Structures|Lipase 3D Structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Triacylglycerol lipase]]
+
[[Category: Large Structures]]
-
[[Category: Bhatia, V K]]
+
[[Category: Thermomyces lanuginosus]]
-
[[Category: Bjerrum, M J]]
+
[[Category: Bhatia VK]]
-
[[Category: Blagova, E V]]
+
[[Category: Bjerrum MJ]]
-
[[Category: Moroz, O V]]
+
[[Category: Blagova EV]]
-
[[Category: Skjold-Joergensen, J]]
+
[[Category: Moroz OV]]
-
[[Category: Svendsen, A]]
+
[[Category: Skjold-Joergensen J]]
-
[[Category: Vind, J]]
+
[[Category: Svendsen A]]
-
[[Category: Wilson, K S]]
+
[[Category: Vind J]]
-
[[Category: Controlled activity]]
+
[[Category: Wilson KS]]
-
[[Category: Controlled binding]]
+
-
[[Category: Dual switch]]
+
-
[[Category: Engineered disulfide bridge]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Thermomyces lanuginosus lipase]]
+

Current revision

Controlled lid-opening in Thermomyces lanuginosus lipase - a switch for activity and binding

PDB ID 5ap9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools