5cse

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:22, 10 January 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Streptavidin-S112Y-K121E Complexed with Palladium-Containing Biotin Ligand==
==Streptavidin-S112Y-K121E Complexed with Palladium-Containing Biotin Ligand==
-
<StructureSection load='5cse' size='340' side='right' caption='[[5cse]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+
<StructureSection load='5cse' size='340' side='right'caption='[[5cse]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5cse]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/As_4.1583 As 4.1583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CSE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CSE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5cse]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CSE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CSE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SVP:CHLORO{DI-TERT-BUTYL[2-({5-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANOYL}AMINO)ETHYL]-LAMBDA~5~-PHOSPHANYL}(1-PHENYLPROP-1-ENE-1,3-DIYL-KAPPA~2~C~1~,C~3~)PALLADIUM'>SVP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.792&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cse FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cse OCA], [http://pdbe.org/5cse PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cse RCSB], [http://www.ebi.ac.uk/pdbsum/5cse PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5cse ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SVP:CHLORO{DI-TERT-BUTYL[2-({5-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANOYL}AMINO)ETHYL]-LAMBDA~5~-PHOSPHANYL}(1-PHENYLPROP-1-ENE-1,3-DIYL-KAPPA~2~C~1~,C~3~)PALLADIUM'>SVP</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cse FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cse OCA], [https://pdbe.org/5cse PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cse RCSB], [https://www.ebi.ac.uk/pdbsum/5cse PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cse ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV]] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
+
[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5cse" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5cse" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Avidin 3D structures|Avidin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: As 4 1583]]
+
[[Category: Large Structures]]
-
[[Category: Chatterjee, A]]
+
[[Category: Streptomyces avidinii]]
-
[[Category: Finke, A D]]
+
[[Category: Chatterjee A]]
-
[[Category: Marsh, M]]
+
[[Category: Finke AD]]
-
[[Category: Vera, L]]
+
[[Category: Marsh M]]
-
[[Category: Ward, T R]]
+
[[Category: Vera L]]
-
[[Category: Artificial metalloenzyme]]
+
[[Category: Ward TR]]
-
[[Category: Beta barrel]]
+
-
[[Category: Biotin]]
+
-
[[Category: Biotin-binding protein]]
+
-
[[Category: Dimer]]
+
-
[[Category: Palladium]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Suzukiase]]
+

Current revision

Streptavidin-S112Y-K121E Complexed with Palladium-Containing Biotin Ligand

PDB ID 5cse

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools