5dyc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:28, 10 January 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of the human BRPF1 bromodomain in complex with SEED6==
==Crystal structure of the human BRPF1 bromodomain in complex with SEED6==
-
<StructureSection load='5dyc' size='340' side='right' caption='[[5dyc]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
+
<StructureSection load='5dyc' size='340' side='right'caption='[[5dyc]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5dyc]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DYC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DYC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5dyc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DYC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DYC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5GU:7-BROMO-3,4-DIHYDROQUINOXALIN-2(1H)-ONE'>5GU</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5c7n|5c7n]], [[5c85|5c85]], [[5c87|5c87]], [[5c89|5c89]], [[5d7x|5d7x]], [[5dy7|5dy7]], [[5dya|5dya]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5GU:7-BROMO-3,4-DIHYDROQUINOXALIN-2(1H)-ONE'>5GU</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dyc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dyc OCA], [http://pdbe.org/5dyc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dyc RCSB], [http://www.ebi.ac.uk/pdbsum/5dyc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dyc ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dyc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dyc OCA], [https://pdbe.org/5dyc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dyc RCSB], [https://www.ebi.ac.uk/pdbsum/5dyc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dyc ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BRPF1_HUMAN BRPF1_HUMAN]] Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity. Positively regulates the transcription of RUNX1 and RUNX2.<ref>PMID:16387653</ref> <ref>PMID:18794358</ref>
+
[https://www.uniprot.org/uniprot/BRPF1_HUMAN BRPF1_HUMAN] Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity. Positively regulates the transcription of RUNX1 and RUNX2.<ref>PMID:16387653</ref> <ref>PMID:18794358</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 5dyc" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5dyc" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Peregrin|Peregrin]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Caflisch, A]]
+
[[Category: Homo sapiens]]
-
[[Category: Zhu, J]]
+
[[Category: Large Structures]]
-
[[Category: Dna binding protein]]
+
[[Category: Caflisch A]]
-
[[Category: Inhibitor]]
+
[[Category: Zhu J]]
-
[[Category: Transcription]]
+

Current revision

Crystal structure of the human BRPF1 bromodomain in complex with SEED6

PDB ID 5dyc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools