5e3d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:29, 10 January 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of the human BRPF1 bromodomain in complex with SEED7==
==Crystal structure of the human BRPF1 bromodomain in complex with SEED7==
-
<StructureSection load='5e3d' size='340' side='right' caption='[[5e3d]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
+
<StructureSection load='5e3d' size='340' side='right'caption='[[5e3d]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5e3d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E3D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5E3D FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5e3d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5E3D FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5JL:2,8-DITHIOXO-1,2,3,7,8,9-HEXAHYDRO-6H-PURIN-6-ONE'>5JL</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5e3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e3d OCA], [http://pdbe.org/5e3d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5e3d RCSB], [http://www.ebi.ac.uk/pdbsum/5e3d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5e3d ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5JL:2,8-DITHIOXO-1,2,3,7,8,9-HEXAHYDRO-6H-PURIN-6-ONE'>5JL</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5e3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e3d OCA], [https://pdbe.org/5e3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5e3d RCSB], [https://www.ebi.ac.uk/pdbsum/5e3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5e3d ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BRPF1_HUMAN BRPF1_HUMAN]] Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity. Positively regulates the transcription of RUNX1 and RUNX2.<ref>PMID:16387653</ref> <ref>PMID:18794358</ref>
+
[https://www.uniprot.org/uniprot/BRPF1_HUMAN BRPF1_HUMAN] Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity. Positively regulates the transcription of RUNX1 and RUNX2.<ref>PMID:16387653</ref> <ref>PMID:18794358</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5e3d" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5e3d" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Peregrin|Peregrin]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Caflisch, A]]
+
[[Category: Homo sapiens]]
-
[[Category: Zhu, J]]
+
[[Category: Large Structures]]
-
[[Category: Dna binding protein]]
+
[[Category: Caflisch A]]
-
[[Category: Inhibitor]]
+
[[Category: Zhu J]]
-
[[Category: Transcription]]
+

Current revision

Crystal structure of the human BRPF1 bromodomain in complex with SEED7

PDB ID 5e3d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools