This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2mdl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:37, 10 January 2024) (edit) (undo)
 
Line 1: Line 1:
==Structure and NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)==
==Structure and NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)==
-
<StructureSection load='2mdl' size='340' side='right'caption='[[2mdl]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2mdl' size='340' side='right'caption='[[2mdl]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2mdl]] is a 1 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2lrf 2lrf]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MDL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2mdl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Scylla_serrata Scylla serrata]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2lrf 2lrf]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MDL FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mdl OCA], [https://pdbe.org/2mdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mdl RCSB], [https://www.ebi.ac.uk/pdbsum/2mdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mdl ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mdl OCA], [https://pdbe.org/2mdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mdl RCSB], [https://www.ebi.ac.uk/pdbsum/2mdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mdl ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ALPS_SCYSE ALPS_SCYSE]] Binds to bacterial LPS and may specifically inhibit the LPS-mediated activation of the hemolymph coagulation. It has a strong antibacterial effect especially on the growth of Gram-negative bacteria.<ref>PMID:19490944</ref> <ref>PMID:21195157</ref>
+
[https://www.uniprot.org/uniprot/ALPS_SCYSE ALPS_SCYSE] Binds to bacterial LPS and may specifically inhibit the LPS-mediated activation of the hemolymph coagulation. It has a strong antibacterial effect especially on the growth of Gram-negative bacteria.<ref>PMID:19490944</ref> <ref>PMID:21195157</ref>
== References ==
== References ==
<references/>
<references/>
Line 13: Line 14:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Barnwal, R]]
+
[[Category: Scylla serrata]]
-
[[Category: Reddy, K]]
+
[[Category: Barnwal R]]
-
[[Category: Sharma, S]]
+
[[Category: Reddy K]]
-
[[Category: Yedery, R]]
+
[[Category: Sharma S]]
-
[[Category: Antimicrobial]]
+
[[Category: Yedery R]]
-
[[Category: Antimicrobial protein]]
+

Current revision

Structure and NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)

PDB ID 2mdl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools