This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4he5
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:4he5.png|left|200px]] | ||
| - | + | ==Crystal structure of the selenomethionine variant of the C-terminal domain of Geobacillus thermoleovorans putative U32 peptidase== | |
| + | <StructureSection load='4he5' size='340' side='right'caption='[[4he5]], [[Resolution|resolution]] 1.15Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4he5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_thermoleovorans_CCB_US3_UF5 Geobacillus thermoleovorans CCB_US3_UF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HE5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HE5 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4he5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4he5 OCA], [https://pdbe.org/4he5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4he5 RCSB], [https://www.ebi.ac.uk/pdbsum/4he5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4he5 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/G8N3E1_GEOTH G8N3E1_GEOTH] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | While small organic molecules generally crystallize forming tightly packed lattices with little solvent content, proteins form air-sensitive high-solvent-content crystals. Here, the crystallization and full structure analysis of a novel recombinant 10 kDa protein corresponding to the C-terminal domain of a putative U32 peptidase are reported. The orthorhombic crystal contained only 24.5% solvent and is therefore among the most tightly packed protein lattices ever reported. | ||
| - | + | Ultratight crystal packing of a 10 kDa protein.,Trillo-Muyo S, Jasilionis A, Domagalski MJ, Chruszcz M, Minor W, Kuisiene N, Arolas JL, Sola M, Gomis-Ruth FX Acta Crystallogr D Biol Crystallogr. 2013 Mar;69(Pt 3):464-70. doi:, 10.1107/S0907444912050135. Epub 2013 Feb 16. PMID:23519421<ref>PMID:23519421</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | == | + | </div> |
| - | [[ | + | <div class="pdbe-citations 4he5" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: Arolas | + | <references/> |
| - | [[Category: Chruszcz | + | __TOC__ |
| - | [[Category: Domagalski | + | </StructureSection> |
| - | [[Category: Gomis-Ruth | + | [[Category: Geobacillus thermoleovorans CCB_US3_UF5]] |
| - | [[Category: Jasilionis | + | [[Category: Large Structures]] |
| - | [[Category: Kuisiene | + | [[Category: Arolas JL]] |
| - | [[Category: Minor | + | [[Category: Chruszcz M]] |
| - | [[Category: Sola | + | [[Category: Domagalski MJ]] |
| - | [[Category: Trillo-Muyo | + | [[Category: Gomis-Ruth FX]] |
| - | + | [[Category: Jasilionis A]] | |
| - | + | [[Category: Kuisiene N]] | |
| + | [[Category: Minor W]] | ||
| + | [[Category: Sola M]] | ||
| + | [[Category: Trillo-Muyo S]] | ||
Current revision
Crystal structure of the selenomethionine variant of the C-terminal domain of Geobacillus thermoleovorans putative U32 peptidase
| |||||||||||
