6i7w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:48, 24 January 2024) (edit) (undo)
 
Line 1: Line 1:
==Structure of the periplasmic binding protein (PBP) AccA in complex with 2-glucose-2-O-lactic acid phosphate (G2LP) from Agrobacterium fabrum C58==
==Structure of the periplasmic binding protein (PBP) AccA in complex with 2-glucose-2-O-lactic acid phosphate (G2LP) from Agrobacterium fabrum C58==
-
<StructureSection load='6i7w' size='340' side='right' caption='[[6i7w]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='6i7w' size='340' side='right'caption='[[6i7w]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6i7w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I7W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6I7W FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6i7w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I7W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6I7W FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=H6Q:[(2~{S})-1,1-bis(oxidanyl)propan-2-yl]+[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]+hydrogen+phosphate'>H6Q</scene>, <scene name='pdbligand=H6Z:[(2~{S})-1,1-bis(oxidanyl)propan-2-yl]+[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]+hydrogen+phosphate'>H6Z</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ra1|4ra1]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=H6Q:2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-beta-D-glucopyranose'>H6Q</scene>, <scene name='pdbligand=H6Z:2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-alpha-D-glucopyranose'>H6Z</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">accA, Atu6139 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6i7w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i7w OCA], [https://pdbe.org/6i7w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6i7w RCSB], [https://www.ebi.ac.uk/pdbsum/6i7w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6i7w ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6i7w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i7w OCA], [http://pdbe.org/6i7w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6i7w RCSB], [http://www.ebi.ac.uk/pdbsum/6i7w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6i7w ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q52012_AGRFC Q52012_AGRFC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Agrfc]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Morera, S]]
+
[[Category: Large Structures]]
-
[[Category: Sahili, A El]]
+
[[Category: El Sahili A]]
-
[[Category: Vigouroux, A]]
+
[[Category: Morera S]]
-
[[Category: Transport protein]]
+
[[Category: Vigouroux A]]

Current revision

Structure of the periplasmic binding protein (PBP) AccA in complex with 2-glucose-2-O-lactic acid phosphate (G2LP) from Agrobacterium fabrum C58

PDB ID 6i7w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6i7w"
Personal tools