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6rav
From Proteopedia
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<StructureSection load='6rav' size='340' side='right'caption='[[6rav]], [[Resolution|resolution]] 1.70Å' scene=''> | <StructureSection load='6rav' size='340' side='right'caption='[[6rav]], [[Resolution|resolution]] 1.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6rav]] is a 2 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6qsv 6qsv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RAV OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6rav]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6qsv 6qsv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RAV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RAV FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=JGQ:4-[(2~{S},4~{S})-4-ethoxy-1-[(5-methoxy-7-methyl-1~{H}-indol-4-yl)methyl]piperidin-2-yl]benzoic+acid'>JGQ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=JGQ:4-[(2~{S},4~{S})-4-ethoxy-1-[(5-methoxy-7-methyl-1~{H}-indol-4-yl)methyl]piperidin-2-yl]benzoic+acid'>JGQ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rav OCA], [https://pdbe.org/6rav PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rav RCSB], [https://www.ebi.ac.uk/pdbsum/6rav PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rav ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Disease == | == Disease == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/CFAB_HUMAN CFAB_HUMAN] Defects in CFB are a cause of susceptibility to hemolytic uremic syndrome atypical type 4 (AHUS4) [MIM:[https://omim.org/entry/612924 612924]. An atypical form of hemolytic uremic syndrome. It is a complex genetic disease characterized by microangiopathic hemolytic anemia, thrombocytopenia, renal failure and absence of episodes of enterocolitis and diarrhea. In contrast to typical hemolytic uremic syndrome, atypical forms have a poorer prognosis, with higher death rates and frequent progression to end-stage renal disease. Note=Susceptibility to the development of atypical hemolytic uremic syndrome can be conferred by mutations in various components of or regulatory factors in the complement cascade system. Other genes may play a role in modifying the phenotype.<ref>PMID:17182750</ref> <ref>PMID:20513133</ref> |
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/CFAB_HUMAN CFAB_HUMAN] Factor B which is part of the alternate pathway of the complement system is cleaved by factor D into 2 fragments: Ba and Bb. Bb, a serine protease, then combines with complement factor 3b to generate the C3 or C5 convertase. It has also been implicated in proliferation and differentiation of preactivated B-lymphocytes, rapid spreading of peripheral blood monocytes, stimulation of lymphocyte blastogenesis and lysis of erythrocytes. Ba inhibits the proliferation of preactivated B-lymphocytes. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Adams | + | [[Category: Adams CM]] |
| - | [[Category: Anderson | + | [[Category: Anderson K]] |
| - | [[Category: Argikar | + | [[Category: Argikar U]] |
| - | [[Category: Crowley | + | [[Category: Crowley M]] |
| - | [[Category: Cumin | + | [[Category: Cumin F]] |
| - | [[Category: Eder | + | [[Category: Eder J]] |
| - | [[Category: Ehara | + | [[Category: Ehara T]] |
| - | [[Category: Erbel | + | [[Category: Erbel P]] |
| - | [[Category: Flohr | + | [[Category: Flohr S]] |
| - | [[Category: Gerhartz | + | [[Category: Gerhartz B]] |
| - | [[Category: Harrison | + | [[Category: Harrison R]] |
| - | [[Category: Hughes | + | [[Category: Hughes N]] |
| - | [[Category: Jaffee | + | [[Category: Jaffee B]] |
| - | [[Category: Karki | + | [[Category: Karki R]] |
| - | [[Category: Maibaum | + | [[Category: Mac Sweeney A]] |
| - | [[Category: Mainolfi | + | [[Category: Maibaum J]] |
| - | [[Category: Mogi | + | [[Category: Mainolfi N]] |
| - | [[Category: Sedrani | + | [[Category: Mogi M]] |
| - | [[Category: Sellner | + | [[Category: Sedrani R]] |
| - | [[Category: Sirockin | + | [[Category: Sellner H]] |
| - | [[Category: Smith | + | [[Category: Sirockin F]] |
| - | + | [[Category: Smith TM]] | |
| - | [[Category: Valeur | + | [[Category: Valeur E]] |
| - | [[Category: Wiesmann | + | [[Category: Wiesmann C]] |
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Current revision
Complement factor B protease domain in complex with the reversible inhibitor 4-((2S,4S)-4-ethoxy-1-((5-methoxy-7-methyl-1H-indol-4-yl)methyl)piperidin-2-yl)benzoic acid
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Categories: Homo sapiens | Large Structures | Adams CM | Anderson K | Argikar U | Crowley M | Cumin F | Eder J | Ehara T | Erbel P | Flohr S | Gerhartz B | Harrison R | Hughes N | Jaffee B | Karki R | Mac Sweeney A | Maibaum J | Mainolfi N | Mogi M | Sedrani R | Sellner H | Sirockin F | Smith TM | Valeur E | Wiesmann C
