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6szg

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Current revision (12:51, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6szg' size='340' side='right'caption='[[6szg]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
<StructureSection load='6szg' size='340' side='right'caption='[[6szg]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6szg]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SZG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6SZG FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6szg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii Acinetobacter baumannii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SZG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SZG FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=M2E:(4-chlorophenyl)-[(3~{S})-3-oxidanylpiperidin-1-yl]methanone'>M2E</scene>, <scene name='pdbligand=M2K:4,5,6,7-tetrahydro-2~{H}-indazole-3-carboxylic+acid'>M2K</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ditrans,polycis-undecaprenyl-diphosphate_synthase_((2E,6E)-farnesyl-_diphosphate_specific) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl- diphosphate specific)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.31 2.5.1.31] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=M2E:(4-chlorophenyl)-[(3~{S})-3-oxidanylpiperidin-1-yl]methanone'>M2E</scene>, <scene name='pdbligand=M2K:4,5,6,7-tetrahydro-2~{H}-indazole-3-carboxylic+acid'>M2K</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6szg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6szg OCA], [http://pdbe.org/6szg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6szg RCSB], [http://www.ebi.ac.uk/pdbsum/6szg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6szg ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6szg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6szg OCA], [https://pdbe.org/6szg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6szg RCSB], [https://www.ebi.ac.uk/pdbsum/6szg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6szg ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/V5VCK8_ACIBA V5VCK8_ACIBA]] Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.[HAMAP-Rule:MF_01139]
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[https://www.uniprot.org/uniprot/V5VCK8_ACIBA V5VCK8_ACIBA] Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.[HAMAP-Rule:MF_01139]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6szg" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6szg" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Undecaprenyl pyrophosphate synthase|Undecaprenyl pyrophosphate synthase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Acinetobacter baumannii]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Thorpe, J H]]
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[[Category: Thorpe JH]]
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[[Category: Inhibitor complex]]
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[[Category: Transferase]]
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Current revision

Acinetobacter baumannii undecaprenyl pyrophosphate synthase (AB-UppS) in complex with GR839 and GSK513

PDB ID 6szg

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