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6tn6

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Current revision (13:05, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6tn6' size='340' side='right'caption='[[6tn6]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='6tn6' size='340' side='right'caption='[[6tn6]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6tn6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thep1 Thep1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TN6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TN6 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6tn6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_petrophila_RKU-1 Thermotoga petrophila RKU-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TN6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TN6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3pz9|3pz9]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tpet_1542 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=390874 THEP1])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tn6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tn6 OCA], [https://pdbe.org/6tn6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tn6 RCSB], [https://www.ebi.ac.uk/pdbsum/6tn6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tn6 ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannan_endo-1,4-beta-mannosidase Mannan endo-1,4-beta-mannosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.78 3.2.1.78] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tn6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tn6 OCA], [http://pdbe.org/6tn6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tn6 RCSB], [http://www.ebi.ac.uk/pdbsum/6tn6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tn6 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A5IMX7_THEP1 A5IMX7_THEP1]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Mannan endo-1,4-beta-mannosidase]]
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[[Category: Thermotoga petrophila RKU-1]]
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[[Category: Thep1]]
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[[Category: Garcia W]]
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[[Category: Garcia, W]]
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[[Category: Martin L]]
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[[Category: Martin, L]]
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[[Category: Muniz JRC]]
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[[Category: Muniz, J R.C]]
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[[Category: Nicolet Y]]
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[[Category: Nicolet, Y]]
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[[Category: Sperenca M]]
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[[Category: Silva, V M.da]]
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[[Category: Squina FM]]
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[[Category: Sperenca, M]]
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[[Category: Da Silva VM]]
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[[Category: Squina, F M]]
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[[Category: Hydrolase]]
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[[Category: Hyperthermophile]]
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[[Category: Mannanase]]
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Current revision

X-ray structure of the endo-beta-1,4-mannanase from Thermotoga petrophila

PDB ID 6tn6

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