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6xwe

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Current revision (13:14, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6xwe' size='340' side='right'caption='[[6xwe]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
<StructureSection load='6xwe' size='340' side='right'caption='[[6xwe]], [[Resolution|resolution]] 1.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6xwe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Barrel_medic Barrel medic]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XWE OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6XWE FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6xwe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Medicago_truncatula Medicago truncatula]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XWE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XWE FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.49&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LYK3, HCL, RLK3, MTR_5g086130 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3880 Barrel medic])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xwe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xwe OCA], [https://pdbe.org/6xwe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xwe RCSB], [https://www.ebi.ac.uk/pdbsum/6xwe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xwe ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6xwe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xwe OCA], [http://pdbe.org/6xwe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6xwe RCSB], [http://www.ebi.ac.uk/pdbsum/6xwe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6xwe ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/LYK3_MEDTR LYK3_MEDTR]] Putative receptor for S.meliloti Nod factor signals essential for the establishment of the nitrogen-fixing, root nodule symbiosis with S.meliloti (PubMed:20971894, PubMed:12947035, PubMed:17586690, PubMed:25351493). Involved in the control of root hair curling after S.meliloti infection, probably by modulating the reorganization of the microtubular cytoskeleton in epidermal and cortical cells (PubMed:17586690, PubMed:11290290). Regulates a subset of Nod factor-induced genes (PubMed:17586690).<ref>PMID:11290290</ref> <ref>PMID:12947035</ref> <ref>PMID:17586690</ref> <ref>PMID:20971894</ref> <ref>PMID:25351493</ref>
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[https://www.uniprot.org/uniprot/LYK3_MEDTR LYK3_MEDTR] Putative receptor for S.meliloti Nod factor signals essential for the establishment of the nitrogen-fixing, root nodule symbiosis with S.meliloti (PubMed:20971894, PubMed:12947035, PubMed:17586690, PubMed:25351493). Involved in the control of root hair curling after S.meliloti infection, probably by modulating the reorganization of the microtubular cytoskeleton in epidermal and cortical cells (PubMed:17586690, PubMed:11290290). Regulates a subset of Nod factor-induced genes (PubMed:17586690).<ref>PMID:11290290</ref> <ref>PMID:12947035</ref> <ref>PMID:17586690</ref> <ref>PMID:20971894</ref> <ref>PMID:25351493</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Barrel medic]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Non-specific serine/threonine protein kinase]]
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[[Category: Medicago truncatula]]
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[[Category: Andersen, K R]]
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[[Category: Andersen KR]]
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[[Category: Blaise, M]]
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[[Category: Blaise M]]
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[[Category: Gysel, K]]
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[[Category: Gysel K]]
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[[Category: Lysm]]
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[[Category: Plant protein]]
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[[Category: Receptor]]
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[[Category: Symbiosis]]
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Current revision

Crystal structure of LYK3 ectodomain

PDB ID 6xwe

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