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6yck
From Proteopedia
(Difference between revisions)
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<StructureSection load='6yck' size='340' side='right'caption='[[6yck]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='6yck' size='340' side='right'caption='[[6yck]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6yck]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[6yck]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Amycolatopsis_sp._ATCC_39116 Amycolatopsis sp. ATCC 39116]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YCK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YCK FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=V55:4-HYDROXY-3-METHOXYBENZALDEHYDE'>V55</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=V55:4-HYDROXY-3-METHOXYBENZALDEHYDE'>V55</scene></td></tr> | |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yck OCA], [https://pdbe.org/6yck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yck RCSB], [https://www.ebi.ac.uk/pdbsum/6yck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yck ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yck OCA], [https://pdbe.org/6yck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yck RCSB], [https://www.ebi.ac.uk/pdbsum/6yck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yck ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/GCOA_AMYS7 GCOA_AMYS7] Part of a two-component P450 system that efficiently O-demethylates diverse aromatic substrates such as guaiacol and a wide variety of lignin-derived monomers. Is likely involved in lignin degradation, allowing Amycolatopsis sp. ATCC 39116 to catabolize plant biomass. GcoA binds and processes the substrate with electrons supplied by the GcoB subunit.<ref>PMID:29950589</ref> | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Amycolatopsis sp. ATCC 39116]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Allen | + | [[Category: Allen MD]] |
| - | [[Category: Beckham | + | [[Category: Beckham GT]] |
| - | [[Category: DuBois | + | [[Category: DuBois JL]] |
| - | [[Category: Ellis | + | [[Category: Ellis ES]] |
| - | [[Category: Hinchen | + | [[Category: Hinchen DJ]] |
| - | [[Category: Mallinson | + | [[Category: Mallinson SJB]] |
| - | [[Category: McGeehan | + | [[Category: McGeehan JE]] |
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Current revision
Crystal structure of GcoA T296A bound to p-vanillin
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