This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6yjf
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEGSmear at pH 6.5== | ==Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEGSmear at pH 6.5== | ||
| - | <StructureSection load='6yjf' size='340' side='right'caption='[[6yjf]]' scene=''> | + | <StructureSection load='6yjf' size='340' side='right'caption='[[6yjf]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YJF FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6yjf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YJF FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yjf OCA], [https://pdbe.org/6yjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yjf RCSB], [https://www.ebi.ac.uk/pdbsum/6yjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yjf ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OTQ:(2~{S})-2-(5-nitrofuran-2-yl)-2,3,5,6,7,8-hexahydro-1~{H}-[1]benzothiolo[2,3-d]pyrimidin-4-one'>OTQ</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yjf OCA], [https://pdbe.org/6yjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yjf RCSB], [https://www.ebi.ac.uk/pdbsum/6yjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yjf ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A5K6T9_PLAVS A5K6T9_PLAVS] | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Phosphoglycerate kinase 3D structures|Phosphoglycerate kinase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Plasmodium vivax]] | ||
[[Category: Blaszczyk BK]] | [[Category: Blaszczyk BK]] | ||
[[Category: Brear P]] | [[Category: Brear P]] | ||
[[Category: Hyvonen M]] | [[Category: Hyvonen M]] | ||
Current revision
Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEGSmear at pH 6.5
| |||||||||||
