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6zcc

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Current revision (13:46, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6zcc' size='340' side='right'caption='[[6zcc]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
<StructureSection load='6zcc' size='340' side='right'caption='[[6zcc]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6zcc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhoso Rhoso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZCC FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6zcc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZCC FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=OEH:[9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium'>OEH</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.52&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[6y7a|6y7a]], [[6y7b|6y7b]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=OEH:[9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium'>OEH</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dhaA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1831 RHOSO])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Haloalkane_dehalogenase Haloalkane dehalogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.8.1.5 3.8.1.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zcc OCA], [https://pdbe.org/6zcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zcc RCSB], [https://www.ebi.ac.uk/pdbsum/6zcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zcc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zcc OCA], [https://pdbe.org/6zcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zcc RCSB], [https://www.ebi.ac.uk/pdbsum/6zcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zcc ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DHAA_RHOSO DHAA_RHOSO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Haloalkane dehalogenase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Rhoso]]
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[[Category: Rhodococcus sp]]
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[[Category: Hiblot, J]]
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[[Category: Hiblot J]]
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[[Category: Johnsson, K]]
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[[Category: Johnsson K]]
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[[Category: Tarnawski, M]]
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[[Category: Tarnawski M]]
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[[Category: Halo]]
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[[Category: Halotag7]]
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[[Category: Hydrolase]]
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[[Category: Oligonucleotide binder]]
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[[Category: Self-labeling protein]]
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[[Category: Tag]]
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[[Category: Tetramethylrhodamine]]
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Current revision

X-ray structure of the Haloalkane dehalogenase HOB (HaloTag7-based Oligonucleotide Binder) labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate

PDB ID 6zcc

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OCA

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