1ar5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:32, 7 February 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ar5.gif|left|200px]]
 
-
{{Structure
+
==X-RAY STRUCTURE OF THE CAMBIALISTIC SUPEROXIDE DISMUTASE FROM PROPIONIBACTERIUM SHERMANII ACTIVE WITH FE OR MN==
-
|PDB= 1ar5 |SIZE=350|CAPTION= <scene name='initialview01'>1ar5</scene>, resolution 1.6&Aring;
+
<StructureSection load='1ar5' size='340' side='right'caption='[[1ar5]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
|SITE= <scene name='pdbsite=FE1:Fe+Binding+Site'>FE1</scene> and <scene name='pdbsite=FE2:Fe+Binding+Site'>FE2</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>
+
<table><tr><td colspan='2'>[[1ar5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Propionibacterium_freudenreichii_subsp._shermanii Propionibacterium freudenreichii subsp. shermanii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AR5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AR5 FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ar5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ar5 OCA], [https://pdbe.org/1ar5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ar5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ar5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ar5 ProSAT]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ar5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ar5 OCA], [http://www.ebi.ac.uk/pdbsum/1ar5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ar5 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/SODM_PROFR SODM_PROFR] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ar/1ar5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ar5 ConSurf].
 +
<div style="clear:both"></div>
-
'''X-RAY STRUCTURE OF THE CAMBIALISTIC SUPEROXIDE DISMUTASE FROM PROPIONIBACTERIUM SHERMANII ACTIVE WITH FE OR MN'''
+
==See Also==
-
 
+
*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1AR5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Propionibacterium_freudenreichii_subsp._shermanii Propionibacterium freudenreichii subsp. shermanii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AR5 OCA].
+
[[Category: Large Structures]]
[[Category: Propionibacterium freudenreichii subsp. shermanii]]
[[Category: Propionibacterium freudenreichii subsp. shermanii]]
-
[[Category: Single protein]]
+
[[Category: Meier B]]
-
[[Category: Superoxide dismutase]]
+
[[Category: Parak F]]
-
[[Category: Meier, B.]]
+
[[Category: Schmidt M]]
-
[[Category: Parak, F.]]
+
-
[[Category: Schmidt, M.]]
+
-
[[Category: degrades o2-]]
+
-
[[Category: dismutase]]
+
-
[[Category: oxidoreductase]]
+
-
[[Category: superoxide dismutase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 18:46:03 2008''
+

Current revision

X-RAY STRUCTURE OF THE CAMBIALISTIC SUPEROXIDE DISMUTASE FROM PROPIONIBACTERIUM SHERMANII ACTIVE WITH FE OR MN

PDB ID 1ar5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools