This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1bk6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:36, 7 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1bk6.png|left|200px]]
 
-
<!--
+
==KARYOPHERIN ALPHA (YEAST) + SV40 T ANTIGEN NLS==
-
The line below this paragraph, containing "STRUCTURE_1bk6", creates the "Structure Box" on the page.
+
<StructureSection load='1bk6' size='340' side='right'caption='[[1bk6]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1bk6]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BK6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BK6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bk6 OCA], [https://pdbe.org/1bk6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bk6 RCSB], [https://www.ebi.ac.uk/pdbsum/1bk6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bk6 ProSAT]</span></td></tr>
-
{{STRUCTURE_1bk6| PDB=1bk6 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/IMA1_YEAST IMA1_YEAST] Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Promotes docking of import substrates to the nuclear envelope. Seems to act as a cytosolic receptor for both simple and bipartite NLS motifs (By similarity).<ref>PMID:7565597</ref> <ref>PMID:10913188</ref> <ref>PMID:21075847</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bk/1bk6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bk6 ConSurf].
 +
<div style="clear:both"></div>
-
===KARYOPHERIN ALPHA (YEAST) + SV40 T ANTIGEN NLS===
+
==See Also==
-
 
+
*[[Importin 3D structures|Importin 3D structures]]
-
 
+
*[[Large T Antigen|Large T Antigen]]
-
<!--
+
== References ==
-
The line below this paragraph, {{ABSTRACT_PUBMED_9695948}}, adds the Publication Abstract to the page
+
<references/>
-
(as it appears on PubMed at http://www.pubmed.gov), where 9695948 is the PubMed ID number.
+
__TOC__
-
-->
+
</StructureSection>
-
{{ABSTRACT_PUBMED_9695948}}
+
[[Category: Large Structures]]
-
 
+
-
==About this Structure==
+
-
1BK6 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BK6 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:9695948</ref><references group="xtra"/>
+
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Blobel, G.]]
+
[[Category: Blobel G]]
-
[[Category: Conti, E.]]
+
[[Category: Conti E]]
-
[[Category: Kuriyan, J.]]
+
[[Category: Kuriyan J]]
-
[[Category: Leighton, L.]]
+
[[Category: Leighton L]]
-
[[Category: Uy, M.]]
+
[[Category: Uy M]]
-
[[Category: Armadillo repeat containing protein]]
+
-
[[Category: Nls nuclear import]]
+
-
[[Category: Protein transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:11:33 2009''
+

Current revision

KARYOPHERIN ALPHA (YEAST) + SV40 T ANTIGEN NLS

PDB ID 1bk6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools