This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1eri

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:06, 7 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1eri.png|left|200px]]
 
-
<!--
+
==X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE-DNA RECOGNITION COMPLEX: THE RECOGNITION NETWORK AND THE INTEGRATION OF RECOGNITION AND CLEAVAGE==
-
The line below this paragraph, containing "STRUCTURE_1eri", creates the "Structure Box" on the page.
+
<StructureSection load='1eri' size='340' side='right'caption='[[1eri]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1eri]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1r1e 1r1e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ERI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ERI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eri OCA], [https://pdbe.org/1eri PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eri RCSB], [https://www.ebi.ac.uk/pdbsum/1eri PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eri ProSAT]</span></td></tr>
-
{{STRUCTURE_1eri| PDB=1eri | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/T2E1_ECOLX T2E1_ECOLX] Recognizes the double-stranded sequence GAATTC and cleaves after G-1.
-
===X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE-DNA RECOGNITION COMPLEX: THE RECOGNITION NETWORK AND THE INTEGRATION OF RECOGNITION AND CLEAVAGE===
+
==See Also==
-
 
+
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1ERI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1r1e 1r1e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ERI OCA].
+
-
 
+
-
==Reference==
+
-
Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing., Kim YC, Grable JC, Love R, Greene PJ, Rosenberg JM, Science. 1990 Sep 14;249(4974):1307-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/2399465 2399465]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Grable, J C.]]
+
[[Category: Grable JC]]
-
[[Category: Greene, P J.]]
+
[[Category: Greene PJ]]
-
[[Category: Kim, Y.]]
+
[[Category: Kim Y]]
-
[[Category: Love, R.]]
+
[[Category: Love R]]
-
[[Category: Rosenberg, J M.]]
+
[[Category: Rosenberg JM]]
-
[[Category: Double helix]]
+
-
[[Category: Protein-dna complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 01:45:46 2008''
+

Current revision

X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE-DNA RECOGNITION COMPLEX: THE RECOGNITION NETWORK AND THE INTEGRATION OF RECOGNITION AND CLEAVAGE

PDB ID 1eri

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools