This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1ewa
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1ewa.png|left|200px]] | ||
| - | + | ==Dehaloperoxidase and 4-iodophenol== | |
| - | + | <StructureSection load='1ewa' size='340' side='right'caption='[[1ewa]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1ewa]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EWA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EWA FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOL:4-IODOPHENOL'>IOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ewa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ewa OCA], [https://pdbe.org/1ewa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ewa RCSB], [https://www.ebi.ac.uk/pdbsum/1ewa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ewa ProSAT]</span></td></tr> |
| - | [[1ewa]] is a 2 chain structure | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9NAV8_9ANNE Q9NAV8_9ANNE] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/1ewa_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ewa ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Dehaloperoxidase|Dehaloperoxidase]] | + | *[[Dehaloperoxidase 3D structures|Dehaloperoxidase 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
[[Category: Amphitrite ornata]] | [[Category: Amphitrite ornata]] | ||
| - | [[Category: Chen | + | [[Category: Large Structures]] |
| - | [[Category: Han | + | [[Category: Chen YP]] |
| - | [[Category: LaCount | + | [[Category: Han K]] |
| - | [[Category: Lebioda | + | [[Category: LaCount MW]] |
| - | [[Category: Lincoln | + | [[Category: Lebioda L]] |
| - | [[Category: Whitton | + | [[Category: Lincoln DE]] |
| - | [[Category: Woodin | + | [[Category: Whitton MM]] |
| - | [[Category: Zhang | + | [[Category: Woodin SA]] |
| - | + | [[Category: Zhang E]] | |
| - | + | ||
| - | + | ||
Current revision
Dehaloperoxidase and 4-iodophenol
| |||||||||||
Categories: Amphitrite ornata | Large Structures | Chen YP | Han K | LaCount MW | Lebioda L | Lincoln DE | Whitton MM | Woodin SA | Zhang E

