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1faj

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[[Image:1faj.gif|left|200px]]
 
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==INORGANIC PYROPHOSPHATASE==
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The line below this paragraph, containing "STRUCTURE_1faj", creates the "Structure Box" on the page.
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<StructureSection load='1faj' size='340' side='right'caption='[[1faj]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1faj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FAJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FAJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1faj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1faj OCA], [https://pdbe.org/1faj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1faj RCSB], [https://www.ebi.ac.uk/pdbsum/1faj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1faj ProSAT]</span></td></tr>
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{{STRUCTURE_1faj| PDB=1faj | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/IPYR_ECOLI IPYR_ECOLI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/1faj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1faj ConSurf].
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<div style="clear:both"></div>
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'''INORGANIC PYROPHOSPHATASE'''
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==See Also==
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*[[Inorganic pyrophosphatase 3D structures|Inorganic pyrophosphatase 3D structures]]
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__TOC__
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==Overview==
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</StructureSection>
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The refined crystal structures of hexameric soluble inorganic pyrophosphatase from E. coli (E-PPase) are reported to R factors of 18.7 and 18.3% at 2.15 and 2.2 A, respectively. The first contains one independent monomer; the other, two independent monomers, in an R32 unit cell. Because the E-PPase monomer is small with a large open active site, there are relatively few hydrophobic interactions that connect the active-site loops to the five-stranded twisted beta-barrel that is the hydrophobic core of the molecule. The active-site loops are, however, held in place by interactions between monomers around the threefold and twofold symmetry axes of the D(3) hexamer. Consequently, mutations of active-site residues (such as Glu20 and Lysl04) often affect protein stability and oligomeric structure. Conversely, mutations of residues in the interface between monomers (such as His136 and Hisl40) not only affect oligomeric structure but also affect active-site function. The effects of the H136Q and H140Q variants can be explained by the extended ionic interaction between H140, D143 and H136' of the neighbouring monomer. This interaction is further buttressed by an extensive hydrogen-bonding network that appears to explain why the E-PPase hexamer is so stable and also why the H136Q and H140Q variant proteins are less stable as hexamers.
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==About this Structure==
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1FAJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FAJ OCA].
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==Reference==
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Structure of Escherichia coli inorganic pyrophosphatase at 2.2 A resolution., Kankare J, Salminen T, Lahti R, Cooperman BS, Baykov AA, Goldman A, Acta Crystallogr D Biol Crystallogr. 1996 May 1;52(Pt 3):551-63. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15299678 15299678]
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[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Inorganic diphosphatase]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Goldman A]]
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[[Category: Goldman, A.]]
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[[Category: Kankare JA]]
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[[Category: Kankare, J A.]]
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[[Category: Salminen T]]
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[[Category: Salminen, T.]]
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[[Category: Hydrolase]]
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[[Category: Inorganic pyrophosphatase]]
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[[Category: Magnesium]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 16:06:15 2008''
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Current revision

INORGANIC PYROPHOSPHATASE

PDB ID 1faj

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