This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1fvx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:19, 7 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1fvx.png|left|200px]]
 
-
<!--
+
==CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57N OXIDIZED==
-
The line below this paragraph, containing "STRUCTURE_1fvx", creates the "Structure Box" on the page.
+
<StructureSection load='1fvx' size='340' side='right'caption='[[1fvx]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1fvx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_beijerinckii Clostridium beijerinckii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FVX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FVX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-
{{STRUCTURE_1fvx| PDB=1fvx | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fvx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fvx OCA], [https://pdbe.org/1fvx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fvx RCSB], [https://www.ebi.ac.uk/pdbsum/1fvx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fvx ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FLAV_CLOBE FLAV_CLOBE] Low-potential electron donor to a number of redox enzymes.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fv/1fvx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fvx ConSurf].
 +
<div style="clear:both"></div>
-
===CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57N OXIDIZED===
+
==See Also==
-
 
+
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_9063874}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 9063874 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_9063874}}
+
-
 
+
-
==About this Structure==
+
-
1FVX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_beijerinckii Clostridium beijerinckii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FVX OCA].
+
-
 
+
-
==Reference==
+
-
Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes., Ludwig ML, Pattridge KA, Metzger AL, Dixon MM, Eren M, Feng Y, Swenson RP, Biochemistry. 1997 Feb 11;36(6):1259-80. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9063874 9063874]
+
[[Category: Clostridium beijerinckii]]
[[Category: Clostridium beijerinckii]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Dixon, M M.]]
+
[[Category: Dixon MM]]
-
[[Category: Eren, M.]]
+
[[Category: Eren M]]
-
[[Category: Feng, Y.]]
+
[[Category: Feng Y]]
-
[[Category: Ludwig, M L.]]
+
[[Category: Ludwig ML]]
-
[[Category: Metzger, A L.]]
+
[[Category: Metzger AL]]
-
[[Category: Pattridge, K A.]]
+
[[Category: Pattridge KA]]
-
[[Category: Swenson, R.]]
+
[[Category: Swenson R]]
-
[[Category: Electron transport]]
+
-
[[Category: Flavoprotein]]
+
-
[[Category: Fmn]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 04:01:22 2008''
+

Current revision

CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57N OXIDIZED

PDB ID 1fvx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1fvx"
Personal tools