1g2c
From Proteopedia
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- | [[Image:1g2c.gif|left|200px]] | ||
- | + | ==HUMAN RESPIRATORY SYNCYTIAL VIRUS FUSION PROTEIN CORE== | |
- | + | <StructureSection load='1g2c' size='340' side='right'caption='[[1g2c]], [[Resolution|resolution]] 2.30Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1g2c]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_respiratory_syncytial_virus_strain_RSS-2 Human respiratory syncytial virus strain RSS-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G2C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G2C FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g2c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g2c OCA], [https://pdbe.org/1g2c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g2c RCSB], [https://www.ebi.ac.uk/pdbsum/1g2c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g2c ProSAT]</span></td></tr> | |
- | + | </table> | |
- | + | == Function == | |
- | + | [https://www.uniprot.org/uniprot/FUS_HRSVR FUS_HRSVR] Class I viral fusion protein. Under the current model, the protein has at least 3 conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and plasma cell membrane fusion, the heptad repeat (HR) regions assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and plasma cell membranes. Directs fusion of viral and cellular membranes leading to delivery of the nucleocapsid into the cytoplasm. This fusion is pH independent and occurs directly at the outer cell membrane. The trimer of F1-F2 (protein F) interacts with glycoprotein G at the virion surface. Upon binding of G to heparan sulfate, the hydrophobic fusion peptide is unmasked and interacts with the cellular membrane, inducing the fusion between host cell and virion membranes. Notably, RSV fusion protein is able to interact directly with heparan sulfate and therefore actively participates in virus attachment. Furthermore, the F2 subunit was identifed as the major determinant of RSV host cell specificity. Later in infection, proteins F expressed at the plasma membrane of infected cells mediate fusion with adjacent cells to form syncytia, a cytopathic effect that could lead to tissue necrosis. The fusion protein is also able to trigger p53-dependent apoptosis (By similarity). | |
- | + | == Evolutionary Conservation == | |
- | + | [[Image:Consurf_key_small.gif|200px|right]] | |
- | + | Check<jmol> | |
- | + | <jmolCheckbox> | |
- | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/1g2c_consurf.spt"</scriptWhenChecked> | |
- | == | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
- | + | <text>to colour the structure by Evolutionary Conservation</text> | |
- | + | </jmolCheckbox> | |
- | == | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g2c ConSurf]. |
- | + | <div style="clear:both"></div> | |
- | + | __TOC__ | |
- | = | + | </StructureSection> |
- | + | [[Category: Human respiratory syncytial virus strain RSS-2]] | |
- | [[Category: Human respiratory syncytial virus | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Kim PS]] |
- | [[Category: Kim | + | [[Category: Malashkevich VN]] |
- | [[Category: Malashkevich | + | [[Category: Singh M]] |
- | [[Category: Singh | + | [[Category: Zhao X]] |
- | [[Category: Zhao | + | |
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Current revision
HUMAN RESPIRATORY SYNCYTIAL VIRUS FUSION PROTEIN CORE
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