This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1g6s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:23, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1g6s.png|left|200px]]
 
-
<!--
+
==STRUCTURE OF EPSP SYNTHASE LIGANDED WITH SHIKIMATE-3-PHOSPHATE AND GLYPHOSATE==
-
The line below this paragraph, containing "STRUCTURE_1g6s", creates the "Structure Box" on the page.
+
<StructureSection load='1g6s' size='340' side='right'caption='[[1g6s]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1g6s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G6S FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GPJ:GLYPHOSATE'>GPJ</scene>, <scene name='pdbligand=S3P:SHIKIMATE-3-PHOSPHATE'>S3P</scene></td></tr>
-
{{STRUCTURE_1g6s| PDB=1g6s | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g6s OCA], [https://pdbe.org/1g6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g6s RCSB], [https://www.ebi.ac.uk/pdbsum/1g6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g6s ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AROA_ECOLI AROA_ECOLI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/1g6s_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g6s ConSurf].
 +
<div style="clear:both"></div>
-
===STRUCTURE OF EPSP SYNTHASE LIGANDED WITH SHIKIMATE-3-PHOSPHATE AND GLYPHOSATE===
+
==See Also==
-
 
+
*[[EPSP synthase|EPSP synthase]]
-
 
+
*[[EPSP synthase 3D structures|EPSP synthase 3D structures]]
-
<!--
+
__TOC__
-
The line below this paragraph, {{ABSTRACT_PUBMED_11171958}}, adds the Publication Abstract to the page
+
</StructureSection>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11171958 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_11171958}}
+
-
 
+
-
==About this Structure==
+
-
1G6S is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G6S OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:11171958</ref><references group="xtra"/>
+
-
[[Category: 3-phosphoshikimate 1-carboxyvinyltransferase]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Amrhein, N.]]
+
[[Category: Large Structures]]
-
[[Category: Eschenburg, S.]]
+
[[Category: Amrhein N]]
-
[[Category: Evans, J N.S.]]
+
[[Category: Eschenburg S]]
-
[[Category: Kabsch, W.]]
+
[[Category: Evans JNS]]
-
[[Category: Schloss, J V.]]
+
[[Category: Kabsch W]]
-
[[Category: Schonbrunn, E.]]
+
[[Category: Schloss JV]]
-
[[Category: Shuttleworth, W.]]
+
[[Category: Schonbrunn E]]
-
[[Category: Inside-out alpha-beta barrel]]
+
[[Category: Shuttleworth W]]
-
[[Category: Two-domain structure]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:11:26 2009''
+

Current revision

STRUCTURE OF EPSP SYNTHASE LIGANDED WITH SHIKIMATE-3-PHOSPHATE AND GLYPHOSATE

PDB ID 1g6s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools