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1gaj

From Proteopedia

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{{Seed}}
 
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[[Image:1gaj.png|left|200px]]
 
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==CRYSTAL STRUCTURE OF A NUCLEOTIDE-FREE ATP-BINDING CASSETTE FROM AN ABC TRANSPORTER==
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The line below this paragraph, containing "STRUCTURE_1gaj", creates the "Structure Box" on the page.
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<StructureSection load='1gaj' size='340' side='right'caption='[[1gaj]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1gaj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GAJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GAJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TBU:TERTIARY-BUTYL+ALCOHOL'>TBU</scene></td></tr>
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{{STRUCTURE_1gaj| PDB=1gaj | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gaj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gaj OCA], [https://pdbe.org/1gaj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gaj RCSB], [https://www.ebi.ac.uk/pdbsum/1gaj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gaj ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LIVG_METJA LIVG_METJA] Probable component of a branched-chain amino-acid transport system.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/1gaj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gaj ConSurf].
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<div style="clear:both"></div>
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===CRYSTAL STRUCTURE OF A NUCLEOTIDE-FREE ATP-BINDING CASSETTE FROM AN ABC TRANSPORTER===
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==See Also==
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*[[ABC transporter 3D structures|ABC transporter 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_11470432}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 11470432 is the PubMed ID number.
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{{ABSTRACT_PUBMED_11470432}}
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==About this Structure==
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1GAJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GAJ OCA].
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==Reference==
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Crystal structures of the MJ1267 ATP binding cassette reveal an induced-fit effect at the ATPase active site of an ABC transporter., Karpowich N, Martsinkevich O, Millen L, Yuan YR, Dai PL, MacVey K, Thomas PJ, Hunt JF, Structure. 2001 Jul 3;9(7):571-86. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11470432 11470432]
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[[Category: Methanocaldococcus jannaschii]]
[[Category: Methanocaldococcus jannaschii]]
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[[Category: Single protein]]
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[[Category: Dai PL]]
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[[Category: Dai, P L.]]
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[[Category: Hunt JF]]
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[[Category: Hunt, J F.]]
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[[Category: Karpowich N]]
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[[Category: Karpowich, N.]]
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[[Category: Martsinkevich O]]
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[[Category: Martsinkevich, O.]]
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[[Category: Millen L]]
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[[Category: Millen, L.]]
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[[Category: Thomas PJ]]
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[[Category: Thomas, P J.]]
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[[Category: Yuan Y-R]]
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[[Category: Yuan, Y R.]]
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[[Category: Abc transporter]]
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[[Category: Active transport]]
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[[Category: Atpase]]
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[[Category: Nucleotide-binding domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 04:59:44 2008''
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Current revision

CRYSTAL STRUCTURE OF A NUCLEOTIDE-FREE ATP-BINDING CASSETTE FROM AN ABC TRANSPORTER

PDB ID 1gaj

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