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1gke

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[[Image:1gke.png|left|200px]]
 
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{{STRUCTURE_1gke| PDB=1gke | SCENE= }}
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==RAT TRANSTHYRETIN==
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<StructureSection load='1gke' size='340' side='right'caption='[[1gke]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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===RAT TRANSTHYRETIN===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1gke]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GKE FirstGlance]. <br>
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{{ABSTRACT_PUBMED_9511961}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gke FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gke OCA], [https://pdbe.org/1gke PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gke RCSB], [https://www.ebi.ac.uk/pdbsum/1gke PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gke ProSAT]</span></td></tr>
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==About this Structure==
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</table>
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[[1gke]] is a 4 chain structure of [[Transthyretin]] with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKE OCA].
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== Function ==
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[https://www.uniprot.org/uniprot/TTHY_RAT TTHY_RAT] Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.<ref>PMID:2309926</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/1gke_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gke ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Transthyretin|Transthyretin]]
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*[[Transthyretin 3D structures|Transthyretin 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:009511961</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
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[[Category: Wojtczak, A.]]
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[[Category: Wojtczak A]]
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[[Category: Prealbumin]]
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[[Category: Rat transthyretin]]
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[[Category: Transport of thyroid hormone]]
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[[Category: Transport protein]]
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RAT TRANSTHYRETIN

PDB ID 1gke

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