This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1j7b
From Proteopedia
(Difference between revisions)
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1j7b.png|left|200px]] | ||
| - | + | ==STRUCTURE OF THE ANABAENA FERREDOXIN MUTANT E94K== | |
| - | + | <StructureSection load='1j7b' size='340' side='right'caption='[[1j7b]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1j7b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7120_=_FACHB-418 Nostoc sp. PCC 7120 = FACHB-418]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1qod 1qod]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J7B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J7B FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j7b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j7b OCA], [https://pdbe.org/1j7b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j7b RCSB], [https://www.ebi.ac.uk/pdbsum/1j7b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j7b ProSAT]</span></td></tr> |
| - | [[1j7b]] is a 1 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/FER1_NOSS1 FER1_NOSS1] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j7/1j7b_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j7b ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Ferredoxin|Ferredoxin]] | + | *[[Ferredoxin 3D structures|Ferredoxin 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | < | + | [[Category: Large Structures]] |
| - | [[Category: Nostoc sp. | + | [[Category: Nostoc sp. PCC 7120 = FACHB-418]] |
| - | [[Category: Benning | + | [[Category: Benning MM]] |
| - | [[Category: Chae | + | [[Category: Chae YK]] |
| - | [[Category: Cheng | + | [[Category: Cheng H]] |
| - | [[Category: Gomez-Moreno | + | [[Category: Gomez-Moreno C]] |
| - | [[Category: Holden | + | [[Category: Holden HM]] |
| - | [[Category: Hurley | + | [[Category: Hurley JK]] |
| - | [[Category: Markley | + | [[Category: Markley JL]] |
| - | [[Category: Martinez-Julvez | + | [[Category: Martinez-Julvez M]] |
| - | [[Category: Schmeits | + | [[Category: Schmeits JL]] |
| - | [[Category: Stankovich | + | [[Category: Stankovich MT]] |
| - | [[Category: Thoden | + | [[Category: Thoden JB]] |
| - | [[Category: Tollin | + | [[Category: Tollin G]] |
| - | [[Category: Vanhooke | + | [[Category: Vanhooke JL]] |
| - | [[Category: Weber-Main | + | [[Category: Weber-Main AM]] |
| - | [[Category: Xia | + | [[Category: Xia B]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
STRUCTURE OF THE ANABAENA FERREDOXIN MUTANT E94K
| |||||||||||

