This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jal

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 7 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jal.png|left|200px]]
 
-
{{STRUCTURE_1jal| PDB=1jal | SCENE= }}
+
==YCHF PROTEIN (HI0393)==
-
 
+
<StructureSection load='1jal' size='340' side='right'caption='[[1jal]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
===YCHF PROTEIN (HI0393)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1jal]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JAL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JAL FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12837776}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jal FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jal OCA], [https://pdbe.org/1jal PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jal RCSB], [https://www.ebi.ac.uk/pdbsum/1jal PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jal ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1jal]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JAL OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YCHF_HAEIN YCHF_HAEIN] ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner (By similarity). Does not hydrolyze GTP.[HAMAP-Rule:MF_00944]<ref>PMID:17430889</ref>
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:012837776</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ja/1jal_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jal ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
-
[[Category: Gilliland, G L.]]
+
[[Category: Large Structures]]
-
[[Category: S2F, Structure 2.Function Project.]]
+
[[Category: Gilliland GL]]
-
[[Category: Teplyakov, A.]]
+
[[Category: Teplyakov A]]
-
[[Category: Nucleotide-binding fold]]
+
-
[[Category: S2f]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structure 2 function project]]
+
-
[[Category: Unknown function]]
+

Current revision

YCHF PROTEIN (HI0393)

PDB ID 1jal

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools