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1jig

From Proteopedia

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(New page: 200px<br /><applet load="1jig" size="450" color="white" frame="true" align="right" spinBox="true" caption="1jig, resolution 1.46&Aring;" /> '''Dlp-2 from Bacillus ...)
Current revision (07:39, 7 February 2024) (edit) (undo)
 
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[[Image:1jig.jpg|left|200px]]<br /><applet load="1jig" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1jig, resolution 1.46&Aring;" />
 
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'''Dlp-2 from Bacillus anthracis'''<br />
 
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==Overview==
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==Dlp-2 from Bacillus anthracis==
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Bacillus anthracis is currently under intense investigation due to its, primary importance as a human pathogen. Particularly important is the, development of novel anti-anthrax vaccines, devoid of the current side, effects. A novel class of immunogenic bacterial proteins consists of, dodecamers homologous to the DNA-binding protein of Escherichia coli, (Dps). Two Dps homologous genes are present in the B. anthracis genome., The crystal structures of these two proteins (Dlp-1 and Dlp-2) have been, determined and are presented here. They are sphere-like proteins with an, internal cavity. We also show that they act as ferritins and are thus, involved in iron uptake and regulation, a fundamental function during, bacterial growth.
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<StructureSection load='1jig' size='340' side='right'caption='[[1jig]], [[Resolution|resolution]] 1.46&Aring;' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>[[1jig]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JIG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JIG FirstGlance]. <br>
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1JIG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis] with FE as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1JIG OCA].
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.46&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
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==Reference==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jig FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jig OCA], [https://pdbe.org/1jig PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jig RCSB], [https://www.ebi.ac.uk/pdbsum/1jig PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jig ProSAT]</span></td></tr>
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Structure of two iron-binding proteins from Bacillus anthracis., Papinutto E, Dundon WG, Pitulis N, Battistutta R, Montecucco C, Zanotti G, J Biol Chem. 2002 Apr 26;277(17):15093-8. Epub 2002 Feb 8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11836250 11836250]
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DPS1_BACAN DPS1_BACAN] Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton Fe(2+) ion (By similarity). It is capable of binding and sequestering Fe(2+) ion. Does not bind DNA.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ji/1jig_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jig ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Bacillus anthracis]]
[[Category: Bacillus anthracis]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Battistutta, R.]]
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[[Category: Battistutta R]]
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[[Category: Dundon, W.G.]]
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[[Category: Dundon WG]]
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[[Category: Montecucco, C.]]
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[[Category: Montecucco C]]
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[[Category: Papinutto, E.]]
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[[Category: Papinutto E]]
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[[Category: Pitulis, N.]]
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[[Category: Pitulis N]]
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[[Category: Zanotti, G.]]
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[[Category: Zanotti G]]
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[[Category: FE]]
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[[Category: dodecamer]]
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[[Category: four-helix bundle]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 18:17:29 2007''
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Current revision

Dlp-2 from Bacillus anthracis

PDB ID 1jig

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