This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jqi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:41, 7 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jqi.png|left|200px]]
 
-
{{STRUCTURE_1jqi| PDB=1jqi | SCENE= }}
+
==Crystal Structure of Rat Short Chain Acyl-CoA Dehydrogenase Complexed With Acetoacetyl-CoA==
-
 
+
<StructureSection load='1jqi' size='340' side='right'caption='[[1jqi]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
===Crystal Structure of Rat Short Chain Acyl-CoA Dehydrogenase Complexed With Acetoacetyl-CoA===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1jqi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JQI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JQI FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11812788}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAA:ACETOACETYL-COENZYME+A'>CAA</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jqi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jqi OCA], [https://pdbe.org/1jqi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jqi RCSB], [https://www.ebi.ac.uk/pdbsum/1jqi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jqi ProSAT]</span></td></tr>
-
[[1jqi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JQI OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ACADS_RAT ACADS_RAT]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jq/1jqi_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jqi ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Acyl-CoA dehydrogenase|Acyl-CoA dehydrogenase]]
*[[Acyl-CoA dehydrogenase|Acyl-CoA dehydrogenase]]
-
 
+
*[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]]
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:011812788</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Butyryl-CoA dehydrogenase]]
+
[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
-
[[Category: Battaile, K P.]]
+
[[Category: Battaile KP]]
-
[[Category: Bennett, D.]]
+
[[Category: Bennett D]]
-
[[Category: Kim, J J.P.]]
+
[[Category: Kim J-JP]]
-
[[Category: Molin-Case, J.]]
+
[[Category: Molin-Case J]]
-
[[Category: Paschke, R.]]
+
[[Category: Paschke R]]
-
[[Category: Vockley, J.]]
+
[[Category: Vockley J]]
-
[[Category: Wang, M.]]
+
[[Category: Wang M]]
-
[[Category: Enzyme-inhibitor complex]]
+
-
[[Category: Flavoprotein]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal Structure of Rat Short Chain Acyl-CoA Dehydrogenase Complexed With Acetoacetyl-CoA

PDB ID 1jqi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools