1k6f

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(New page: 200px<br /><applet load="1k6f" size="450" color="white" frame="true" align="right" spinBox="true" caption="1k6f, resolution 1.3&Aring;" /> '''Crystal Structure of ...)
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[[Image:1k6f.jpg|left|200px]]<br /><applet load="1k6f" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1k6f, resolution 1.3&Aring;" />
 
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'''Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3'''<br />
 
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==Overview==
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==Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3==
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The first report of the full-length structure of the collagen-like, polypeptide [(Pro-Pro-Gly)(10)](3) is given. This structure was obtained, from crystals grown in a microgravity environment, which diffracted up to, 1.3 A, using synchrotron radiation. The final model, which was refined to, an R(factor) of 0.18, is the highest-resolution description of a collagen, triple helix reported to date. This structure provides clues regarding a, series of aspects related to collagen triple helix structure and assembly., The strict dependence of proline puckering on the position inside the, Pro-Pro-Gly triplets and the correlation between backbone and side chain, dihedral angles support the propensity-based mechanism of triple helix, stabilization/destabilization induced by hydroxyproline. Furthermore, the, analysis of [(Pro-Pro-Gly)(10)](3) packing, which is governed by, electrostatic interactions, suggests that charges may act as locking, features in the axial organization of triple helices in the collagen, fibrils.
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<StructureSection load='1k6f' size='340' side='right'caption='[[1k6f]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1k6f]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saimiriine_gammaherpesvirus_2 Saimiriine gammaherpesvirus 2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K6F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K6F FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k6f OCA], [https://pdbe.org/1k6f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k6f RCSB], [https://www.ebi.ac.uk/pdbsum/1k6f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k6f ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q80BK4_SHV2 Q80BK4_SHV2]
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==About this Structure==
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==See Also==
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1K6F is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1K6F OCA].
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*[[Collagen 3D structures|Collagen 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3)., Berisio R, Vitagliano L, Mazzarella L, Zagari A, Protein Sci. 2002 Feb;11(2):262-70. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11790836 11790836]
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[[Category: Large Structures]]
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[[Category: Protein complex]]
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[[Category: Saimiriine gammaherpesvirus 2]]
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[[Category: Berisio, R.]]
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[[Category: Berisio R]]
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[[Category: Mazzarella, L.]]
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[[Category: Mazzarella L]]
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[[Category: Vitagliano, L.]]
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[[Category: Vitagliano L]]
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[[Category: Zagari, A]]
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[[Category: Zagari A]]
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[[Category: amino acid preferences]]
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[[Category: collagen stability]]
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[[Category: puckering]]
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[[Category: triple helix]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 00:49:55 2007''
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Current revision

Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3

PDB ID 1k6f

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