This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1kf0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1kf0" [edit=sysop:move=sysop])
Current revision (07:46, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1kf0.png|left|200px]]
 
-
{{STRUCTURE_1kf0| PDB=1kf0 | SCENE= }}
+
==Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and 3PG==
-
 
+
<StructureSection load='1kf0' size='340' side='right'caption='[[1kf0]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
===Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and 3PG===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1kf0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KF0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KF0 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12102622}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PG:3-PHOSPHOGLYCERIC+ACID'>3PG</scene>, <scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kf0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kf0 OCA], [https://pdbe.org/1kf0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kf0 RCSB], [https://www.ebi.ac.uk/pdbsum/1kf0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kf0 ProSAT]</span></td></tr>
-
[[1kf0]] is a 1 chain structure of [[Phosphoglycerate Kinase]] with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KF0 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PGK1_PIG PGK1_PIG]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kf/1kf0_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kf0 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Phosphoglycerate Kinase|Phosphoglycerate Kinase]]
+
*[[Phosphoglycerate kinase 3D structures|Phosphoglycerate kinase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:012102622</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Phosphoglycerate kinase]]
+
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Flachner, B.]]
+
[[Category: Flachner B]]
-
[[Category: Kovari, Z.]]
+
[[Category: Kovari Z]]
-
[[Category: Naray-Szabo, G.]]
+
[[Category: Naray-Szabo G]]
-
[[Category: Vas, M.]]
+
[[Category: Vas M]]
-
[[Category: Atp analogue]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and 3PG

PDB ID 1kf0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools