This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3agk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:40, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3agk.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of archaeal translation termination factor, aRF1==
-
The line below this paragraph, containing "STRUCTURE_3agk", creates the "Structure Box" on the page.
+
<StructureSection load='3agk' size='340' side='right'caption='[[3agk]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3agk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AGK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3agk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3agk OCA], [https://pdbe.org/3agk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3agk RCSB], [https://www.ebi.ac.uk/pdbsum/3agk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3agk ProSAT]</span></td></tr>
-
{{STRUCTURE_3agk| PDB=3agk | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Archaeal protein===
+
[https://www.uniprot.org/uniprot/RF1_AERPE RF1_AERPE] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (By similarity).
-
 
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
3AGK is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AGK OCA].
+
[[Category: Aeropyrum pernix]]
[[Category: Aeropyrum pernix]]
-
[[Category: Ishitani, R.]]
+
[[Category: Large Structures]]
-
[[Category: Ito, K.]]
+
[[Category: Ishitani R]]
-
[[Category: Kikuno, I.]]
+
[[Category: Ito K]]
-
[[Category: Kobayashi, K.]]
+
[[Category: Kikuno I]]
-
[[Category: Nureki, O.]]
+
[[Category: Kobayashi K]]
-
[[Category: Translation]]
+
[[Category: Nureki O]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 3 11:07:24 2010''
+

Current revision

Crystal structure of archaeal translation termination factor, aRF1

PDB ID 3agk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3agk"
Personal tools