This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3jcf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:43, 7 February 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 3: Line 3:
<SX load='3jcf' size='340' side='right' viewer='molstar' caption='[[3jcf]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
<SX load='3jcf' size='340' side='right' viewer='molstar' caption='[[3jcf]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3jcf]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JCF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JCF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3jcf]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JCF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JCF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3jcg|3jcg]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">corA, TM_0561 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jcf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jcf OCA], [https://pdbe.org/3jcf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jcf RCSB], [https://www.ebi.ac.uk/pdbsum/3jcf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jcf ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jcf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jcf OCA], [http://pdbe.org/3jcf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3jcf RCSB], [http://www.ebi.ac.uk/pdbsum/3jcf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3jcf ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CORA_THEMA CORA_THEMA]] Mediates influx of magnesium ions (By similarity).
+
[https://www.uniprot.org/uniprot/CORA_THEMA CORA_THEMA] Mediates influx of magnesium ions (By similarity).
-
<div style="background-color:#fffaf0;">
+
-
== Publication Abstract from PubMed ==
+
-
CorA, the major Mg(2+) uptake system in prokaryotes, is gated by intracellular Mg(2+) (KD approximately 1-2 mM). X-ray crystallographic studies of CorA show similar conformations under Mg(2+)-bound and Mg(2+)-free conditions, but EPR spectroscopic studies reveal large Mg(2+)-driven quaternary conformational changes. Here, we determined cryo-EM structures of CorA in the Mg(2+)-bound closed conformation and in two open Mg(2+)-free states at resolutions of 3.8, 7.1, and 7.1 A, respectively. In the absence of bound Mg(2+), four of the five subunits are displaced to variable extents ( approximately 10-25 A) by hinge-like motions as large as approximately 35 degrees at the stalk helix. The transition between a single 5-fold symmetric closed state and an ensemble of low Mg(2+), open, asymmetric conformational states is, thus, the key structural signature of CorA gating. This mechanism is likely to apply to other structurally similar divalent ion channels.
+
-
 
+
-
Cryo-EM Structures of the Magnesium Channel CorA Reveal Symmetry Break upon Gating.,Matthies D, Dalmas O, Borgnia MJ, Dominik PK, Merk A, Rao P, Reddy BG, Islam S, Bartesaghi A, Perozo E, Subramaniam S Cell. 2016 Feb 11;164(4):747-56. doi: 10.1016/j.cell.2015.12.055. PMID:26871634<ref>PMID:26871634</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 3jcf" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</SX>
</SX>
-
[[Category: Atcc 43589]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Matthies, D]]
+
[[Category: Thermotoga maritima]]
-
[[Category: Perozo, E]]
+
[[Category: Matthies D]]
-
[[Category: Subramaniam, S]]
+
[[Category: Perozo E]]
-
[[Category: Conformational change]]
+
[[Category: Subramaniam S]]
-
[[Category: Direct electron detector]]
+
-
[[Category: Gating mechanism]]
+
-
[[Category: Ion channel]]
+
-
[[Category: K2]]
+
-
[[Category: Magnesium channel]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Pentameric complex]]
+
-
[[Category: Symmetry vs. asymmetry]]
+
-
[[Category: Transport protein]]
+

Current revision

Cryo-EM structure of the magnesium channel CorA in the closed symmetric magnesium-bound state

3jcf, resolution 3.80Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3jcf"
Personal tools