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1m0f
From Proteopedia
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| - | [[Image:1m0f.png|left|200px]] | ||
| - | + | ==Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy== | |
| - | + | <SX load='1m0f' size='340' side='right' viewer='molstar' caption='[[1m0f]], [[Resolution|resolution]] 16.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1m0f]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_alpha3 Escherichia phage alpha3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M0F FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 16Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m0f OCA], [https://pdbe.org/1m0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m0f RCSB], [https://www.ebi.ac.uk/pdbsum/1m0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m0f ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1m0f]] is a 7 chain structure with sequence from [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/SCAFD_BPPHS SCAFD_BPPHS] Assembles the procapsid by joining twelve 12S pre-assembly complex into a T=1 icosahedral particle, called 108S procapsid. Ten proteins D bind each 12S complex, which are formed by three pentamers of F, G, B protein and a H protein. The scaffolding protein is released from the provirion after genome packaging to form the mature virion.<ref>PMID:15890913</ref> <ref>PMID:159449</ref> | |
| - | == | + | == Evolutionary Conservation == |
| - | < | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m0/1m0f_consurf.spt"</scriptWhenChecked> |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [ | + | </jmolCheckbox> |
| - | [[ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m0f ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </SX> |
| - | [[Category: | + | [[Category: Escherichia phage alpha3]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Baker TS]] |
| - | [[Category: | + | [[Category: Bernal RA]] |
| - | [[Category: | + | [[Category: Bowman VD]] |
| + | [[Category: Chipman PR]] | ||
| + | [[Category: Fane BA]] | ||
| + | [[Category: Hafenstein S]] | ||
| + | [[Category: Olson NH]] | ||
| + | [[Category: Rossmann MG]] | ||
Current revision
Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy
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