This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1m2a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1m2a.png|left|200px]]
 
-
{{STRUCTURE_1m2a| PDB=1m2a | SCENE= }}
+
==Crystal structure at 1.5 Angstroms resolution of the wild type thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus==
-
 
+
<StructureSection load='1m2a' size='340' side='right'caption='[[1m2a]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
===Crystal structure at 1.5 Angstroms resolution of the wild type thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1m2a]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M2A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M2A FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12089152}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m2a OCA], [https://pdbe.org/1m2a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m2a RCSB], [https://www.ebi.ac.uk/pdbsum/1m2a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m2a ProSAT]</span></td></tr>
-
[[1m2a]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M2A OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FER2_AQUAE FER2_AQUAE] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m2/1m2a_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m2a ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Ferredoxin|Ferredoxin]]
+
*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:012089152</ref><references group="xtra"/>
+
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
-
[[Category: Ambroggio, X I.]]
+
[[Category: Large Structures]]
-
[[Category: Andrade, S L.A.]]
+
[[Category: Ambroggio XI]]
-
[[Category: Chatelet, C.]]
+
[[Category: Andrade SLA]]
-
[[Category: Einsle, O.]]
+
[[Category: Chatelet C]]
-
[[Category: Meyer, J.]]
+
[[Category: Einsle O]]
-
[[Category: Rees, D C.]]
+
[[Category: Meyer J]]
-
[[Category: Yeh, A P.]]
+
[[Category: Rees DC]]
-
[[Category: Electron transport]]
+
[[Category: Yeh AP]]
-
[[Category: Ferredoxin]]
+
-
[[Category: Thioredoxin-like fold]]
+

Current revision

Crystal structure at 1.5 Angstroms resolution of the wild type thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus

PDB ID 1m2a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1m2a"
Personal tools