This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1m5h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:39, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1m5h.png|left|200px]]
 
-
{{STRUCTURE_1m5h| PDB=1m5h | SCENE= }}
+
==Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus==
-
 
+
<StructureSection load='1m5h' size='340' side='right'caption='[[1m5h]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1m5h]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M5H FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12192072}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m5h OCA], [https://pdbe.org/1m5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m5h RCSB], [https://www.ebi.ac.uk/pdbsum/1m5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m5h ProSAT]</span></td></tr>
-
[[1m5h]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5H OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/FTR_ARCFU FTR_ARCFU] Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT).<ref>PMID:8481089</ref>
-
<ref group="xtra">PMID:012192072</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m5/1m5h_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m5h ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Archaeoglobus fulgidus]]
[[Category: Archaeoglobus fulgidus]]
-
[[Category: Formylmethanofuran--tetrahydromethanopterin N-formyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: Ermler, U.]]
+
[[Category: Ermler U]]
-
[[Category: Grimm, C.]]
+
[[Category: Grimm C]]
-
[[Category: Mamat, B.]]
+
[[Category: Mamat B]]
-
[[Category: Roth, A.]]
+
[[Category: Roth A]]
-
[[Category: Schubert, D.]]
+
[[Category: Schubert D]]
-
[[Category: Shima, S.]]
+
[[Category: Shima S]]
-
[[Category: Thauer, R K.]]
+
[[Category: Thauer RK]]
-
[[Category: Tziatzios, C.]]
+
[[Category: Tziatzios C]]
-
[[Category: Alpha/beta sandwich]]
+
-
[[Category: Transferase]]
+

Current revision

Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus

PDB ID 1m5h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools