1m8v

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{{Seed}}
 
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[[Image:1m8v.png|left|200px]]
 
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==Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer==
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The line below this paragraph, containing "STRUCTURE_1m8v", creates the "Structure Box" on the page.
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<StructureSection load='1m8v' size='340' side='right'caption='[[1m8v]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1m8v]] is a 21 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M8V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M8V FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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{{STRUCTURE_1m8v| PDB=1m8v | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m8v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m8v OCA], [https://pdbe.org/1m8v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m8v RCSB], [https://www.ebi.ac.uk/pdbsum/1m8v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m8v ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RUXX_PYRAB RUXX_PYRAB]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m8/1m8v_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m8v ConSurf].
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<div style="clear:both"></div>
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===Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer===
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==See Also==
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*[[Sm-like protein|Sm-like protein]]
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*[[Sm-like protein 3D structures|Sm-like protein 3D structures]]
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__TOC__
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The line below this paragraph, {{ABSTRACT_PUBMED_12409299}}, adds the Publication Abstract to the page
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 12409299 is the PubMed ID number.
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[[Category: Large Structures]]
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{{ABSTRACT_PUBMED_12409299}}
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==About this Structure==
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1M8V is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M8V OCA].
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==Reference==
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Crystal structures of the Pyrococcus abyssi Sm core and its complex with RNA. Common features of RNA binding in archaea and eukarya., Thore S, Mayer C, Sauter C, Weeks S, Suck D, J Biol Chem. 2003 Jan 10;278(2):1239-47. Epub 2002 Oct 29. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12409299 12409299]
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[[Category: Pyrococcus abyssi]]
[[Category: Pyrococcus abyssi]]
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[[Category: Single protein]]
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[[Category: Mayer C]]
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[[Category: Mayer, C.]]
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[[Category: Sauter C]]
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[[Category: Sauter, C.]]
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[[Category: Suck D]]
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[[Category: Suck, D.]]
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[[Category: Thore S]]
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[[Category: Thore, S.]]
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[[Category: Weeks S]]
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[[Category: Weeks, S.]]
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[[Category: Protein-rna complex]]
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[[Category: Sm protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 23:27:34 2008''
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Current revision

Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer

PDB ID 1m8v

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