This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1mcz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1mcz" [edit=sysop:move=sysop])
Current revision (07:43, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1mcz.png|left|200px]]
 
-
{{STRUCTURE_1mcz| PDB=1mcz | SCENE= }}
+
==BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA COMPLEXED WITH AN INHIBITOR, R-MANDELATE==
-
 
+
<StructureSection load='1mcz' size='340' side='right'caption='[[1mcz]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
===BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA COMPLEXED WITH AN INHIBITOR, R-MANDELATE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1mcz]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MCZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MCZ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12590569}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=RMN:(R)-MANDELIC+ACID'>RMN</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mcz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mcz OCA], [https://pdbe.org/1mcz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mcz RCSB], [https://www.ebi.ac.uk/pdbsum/1mcz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mcz ProSAT]</span></td></tr>
-
[[1mcz]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MCZ OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/MDLC_PSEPU MDLC_PSEPU]
-
<ref group="xtra">PMID:012590569</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Benzoylformate decarboxylase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mc/1mcz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mcz ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
-
[[Category: Bera, A K.]]
+
[[Category: Bera AK]]
-
[[Category: Hasson, M S.]]
+
[[Category: Hasson MS]]
-
[[Category: Polovnikova, E S.]]
+
[[Category: Polovnikova ES]]
-
[[Category: Decarboxylase]]
+
-
[[Category: Lyase]]
+
-
[[Category: R-mandelate]]
+
-
[[Category: Thiamin diphosphate]]
+

Current revision

BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA COMPLEXED WITH AN INHIBITOR, R-MANDELATE

PDB ID 1mcz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools