This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1mdn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:43, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1mdn.png|left|200px]]
 
-
{{STRUCTURE_1mdn| PDB=1mdn | SCENE= }}
+
==WILD TYPE MYOGLOBIN WITH CO==
-
 
+
<StructureSection load='1mdn' size='340' side='right'caption='[[1mdn]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
-
===WILD TYPE MYOGLOBIN WITH CO===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1mdn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MDN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MDN FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_9843395}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mdn OCA], [https://pdbe.org/1mdn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mdn RCSB], [https://www.ebi.ac.uk/pdbsum/1mdn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mdn ProSAT]</span></td></tr>
-
[[1mdn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MDN OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MYG_PIG MYG_PIG] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/md/1mdn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mdn ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Myoglobin|Myoglobin]]
+
*[[Myoglobin 3D structures|Myoglobin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:009843395</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Brzozowski, A M.]]
+
[[Category: Brzozowski AM]]
-
[[Category: Gibson, Q H.]]
+
[[Category: Gibson QH]]
-
[[Category: Jaskolski, M.]]
+
[[Category: Jaskolski M]]
-
[[Category: Klizas, S A.]]
+
[[Category: Klizas SA]]
-
[[Category: Krzywda, S.]]
+
[[Category: Krzywda S]]
-
[[Category: Murshudov, G N.]]
+
[[Category: Murshudov GN]]
-
[[Category: Olson, J S.]]
+
[[Category: Olson JS]]
-
[[Category: Scott, E E.]]
+
[[Category: Scott EE]]
-
[[Category: Wilkinson, A J.]]
+
[[Category: Wilkinson AJ]]
-
[[Category: Deoxy]]
+
-
[[Category: Myoglobin]]
+
-
[[Category: Oxygen storage]]
+
-
[[Category: Oxygen storage-transport complex]]
+
-
[[Category: V68n]]
+

Current revision

WILD TYPE MYOGLOBIN WITH CO

PDB ID 1mdn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1mdn"
Personal tools