This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1n07

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1n07" [edit=sysop:move=sysop])
Current revision (07:50, 14 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1n07.png|left|200px]]
 
-
{{STRUCTURE_1n07| PDB=1n07 | SCENE= }}
+
==Crystal Structure of Schizosaccharomyces pombe Riboflavin Kinase Reveals a Novel ATP and Riboflavin Binding Fold==
-
 
+
<StructureSection load='1n07' size='340' side='right'caption='[[1n07]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
-
===Crystal Structure of Schizosaccharomyces pombe Riboflavin Kinase Reveals a Novel ATP and Riboflavin Binding Fold===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1n07]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Schizosaccharomyces_pombe Schizosaccharomyces pombe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N07 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12595258}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n07 OCA], [https://pdbe.org/1n07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n07 RCSB], [https://www.ebi.ac.uk/pdbsum/1n07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n07 ProSAT]</span></td></tr>
-
[[1n07]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Schizosaccharomyces_pombe Schizosaccharomyces pombe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N07 OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/RIFK_SCHPO RIFK_SCHPO] Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme.
-
<ref group="xtra">PMID:012595258</ref><ref group="xtra">PMID:015468322</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Riboflavin kinase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n0/1n07_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n07 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Schizosaccharomyces pombe]]
[[Category: Schizosaccharomyces pombe]]
-
[[Category: Bacher, A.]]
+
[[Category: Bacher A]]
-
[[Category: Bauer, S.]]
+
[[Category: Bauer S]]
-
[[Category: Fischer, M.]]
+
[[Category: Fischer M]]
-
[[Category: Huber, R.]]
+
[[Category: Huber R]]
-
[[Category: Kemter, K.]]
+
[[Category: Kemter K]]
-
[[Category: Steinbacher, S.]]
+
[[Category: Steinbacher S]]
-
[[Category: Flavin cofactor]]
+
-
[[Category: Kinase]]
+
-
[[Category: Metal binding]]
+
-
[[Category: Phosphoryl transferase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of Schizosaccharomyces pombe Riboflavin Kinase Reveals a Novel ATP and Riboflavin Binding Fold

PDB ID 1n07

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools