This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1nnw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1nnw.png|left|200px]]
 
-
{{STRUCTURE_1nnw| PDB=1nnw | SCENE= }}
+
==hypothetical protein from Pyrococcus furiosus Pfu-1218608==
-
 
+
<StructureSection load='1nnw' size='340' side='right'caption='[[1nnw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===hypothetical protein from Pyrococcus furiosus Pfu-1218608===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1nnw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NNW FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
-
[[1nnw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNW OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nnw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nnw OCA], [https://pdbe.org/1nnw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nnw RCSB], [https://www.ebi.ac.uk/pdbsum/1nnw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nnw ProSAT], [https://www.topsan.org/Proteins/SECSG/1nnw TOPSAN]</span></td></tr>
-
[[Category: Pyrococcus furiosus]]
+
</table>
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
== Function ==
-
[[Category: Hypothetical protein]]
+
[https://www.uniprot.org/uniprot/Q8U1C6_PYRFU Q8U1C6_PYRFU]
-
[[Category: Protein structure initiative]]
+
== Evolutionary Conservation ==
-
[[Category: Psi]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nn/1nnw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nnw ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Secsg]]
 
-
[[Category: Southeast collaboratory for structural genomic]]
 
-
[[Category: Structural genomic]]
 
-
[[Category: Unknown function]]
 

Current revision

hypothetical protein from Pyrococcus furiosus Pfu-1218608

PDB ID 1nnw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools