1nnx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1nnx.gif|left|200px]]
 
-
<!--
+
==Structure of the hypothetical protein ygiW from E. coli.==
-
The line below this paragraph, containing "STRUCTURE_1nnx", creates the "Structure Box" on the page.
+
<StructureSection load='1nnx' size='340' side='right'caption='[[1nnx]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1nnx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NNX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1nnx| PDB=1nnx | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nnx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nnx OCA], [https://pdbe.org/1nnx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nnx RCSB], [https://www.ebi.ac.uk/pdbsum/1nnx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nnx ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Structure of the hypothetical protein ygiW from E. coli.'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YGIW_ECOLI YGIW_ECOLI]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1NNX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNX OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nn/1nnx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nnx ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Galkin, A.]]
+
[[Category: Galkin A]]
-
[[Category: Herzberg, O.]]
+
[[Category: Herzberg O]]
-
[[Category: Howard, A.]]
+
[[Category: Howard A]]
-
[[Category: Krajewski, W.]]
+
[[Category: Krajewski W]]
-
[[Category: Lehmann, C.]]
+
[[Category: Lehmann C]]
-
[[Category: Lim, K.]]
+
[[Category: Lim K]]
-
[[Category: Pullalarevu, S.]]
+
[[Category: Pullalarevu S]]
-
[[Category: S2F, Structure 2.Function Project.]]
+
[[Category: Sarikaya E]]
-
[[Category: Sarikaya, E.]]
+
-
[[Category: Hypothetical protein]]
+
-
[[Category: Ob-fold]]
+
-
[[Category: S2f]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structure 2 function project]]
+
-
[[Category: Ygiw]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:45:49 2008''
+

Current revision

Structure of the hypothetical protein ygiW from E. coli.

PDB ID 1nnx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1nnx"
Personal tools