This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1p65

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:05, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1p65.png|left|200px]]
 
-
<!--
+
==Crystal structure of the nucleocapsid protein of porcine reproductive and respiratory syndrome virus (PRRSV)==
-
The line below this paragraph, containing "STRUCTURE_1p65", creates the "Structure Box" on the page.
+
<StructureSection load='1p65' size='340' side='right'caption='[[1p65]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1p65]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porcine_reproductive_and_respiratory_syndrome_virus Porcine reproductive and respiratory syndrome virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P65 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P65 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p65 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p65 OCA], [https://pdbe.org/1p65 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p65 RCSB], [https://www.ebi.ac.uk/pdbsum/1p65 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p65 ProSAT]</span></td></tr>
-
{{STRUCTURE_1p65| PDB=1p65 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of the nucleocapsid protein of porcine reproductive and respiratory syndrome virus (PRRSV)===
+
[https://www.uniprot.org/uniprot/Q9YJI1_PRRSV Q9YJI1_PRRSV]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_14604534}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 14604534 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p6/1p65_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_14604534}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1p65 ConSurf].
-
1P65 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Porcine_respiratory_and_reproductive_syndrome_virus Porcine respiratory and reproductive syndrome virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P65 OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:14604534</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Porcine respiratory and reproductive syndrome virus]]
+
[[Category: Porcine reproductive and respiratory syndrome virus]]
-
[[Category: Doan, D N.P.]]
+
[[Category: Doan DNP]]
-
[[Category: Dokland, T.]]
+
[[Category: Dokland T]]
-
[[Category: Nucleocapsid]]
+
-
[[Category: Virus]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 11:08:26 2009''
+

Current revision

Crystal structure of the nucleocapsid protein of porcine reproductive and respiratory syndrome virus (PRRSV)

PDB ID 1p65

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1p65"
Personal tools