This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1p7b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:05, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1p7b.png|left|200px]]
 
-
<!--
+
==Crystal structure of an inward rectifier potassium channel==
-
The line below this paragraph, containing "STRUCTURE_1p7b", creates the "Structure Box" on the page.
+
<StructureSection load='1p7b' size='340' side='right'caption='[[1p7b]], [[Resolution|resolution]] 3.65&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1p7b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P7B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P7B FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.65&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
{{STRUCTURE_1p7b| PDB=1p7b | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p7b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p7b OCA], [https://pdbe.org/1p7b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p7b RCSB], [https://www.ebi.ac.uk/pdbsum/1p7b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p7b ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of an inward rectifier potassium channel===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/P83698_BURPE P83698_BURPE]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_12738871}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12738871 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p7/1p7b_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_12738871}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1p7b]] is a 2 chain structure of [[Ion channels]] with sequence from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P7B OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1p7b ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Ion channels]]
+
*[[Potassium channel 3D structures|Potassium channel 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:12738871</ref><references group="xtra"/>
+
[[Category: Burkholderia pseudomallei]]
[[Category: Burkholderia pseudomallei]]
-
[[Category: Antcliff, J F.]]
+
[[Category: Large Structures]]
-
[[Category: Ashcroft, F M.]]
+
[[Category: Antcliff JF]]
-
[[Category: Cuthbertson, J.]]
+
[[Category: Ashcroft FM]]
-
[[Category: Doyle, D A.]]
+
[[Category: Cuthbertson J]]
-
[[Category: Ezaki, T.]]
+
[[Category: Doyle DA]]
-
[[Category: Gulbis, J M.]]
+
[[Category: Ezaki T]]
-
[[Category: Kuo, A.]]
+
[[Category: Gulbis JM]]
-
[[Category: Lowe, E D.]]
+
[[Category: Kuo A]]
-
[[Category: Rahman, T.]]
+
[[Category: Lowe ED]]
-
[[Category: Zimmer, J.]]
+
[[Category: Rahman T]]
-
[[Category: Cytosolic assembly]]
+
[[Category: Zimmer J]]
-
[[Category: Immunoglobulin fold]]
+
-
[[Category: Ion conduction]]
+
-
[[Category: Metal transport]]
+
-
[[Category: Transmembrane helice]]
+

Current revision

Crystal structure of an inward rectifier potassium channel

PDB ID 1p7b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1p7b"
Personal tools